SMTL ID : 5kso.1

hMiro1 C-domain GDP-Pi Complex P3121 Crystal Form

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 2.25 Å

Oligo State

monomer

Ligands

1 x GDP: GUANOSINE-5'-DIPHOSPHATE(Non-covalent)

GDP.1: 19 residues within 4Å: Chain A: V.16, K.17, N.18, C.19, G.20, K.21, S.22, G.23, L.33, K.37, K.44, D.65, K.118, D.120, L.121, T.148, C.149, N.150 Ligands: PO4.2 20 PLIP interactions: 20 interactions with chain A Hydrogen bonds: A:N.18, A:C.19, A:G.20, A:K.21, A:S.22, A:G.23, A:K.37, A:D.65, A:K.118, A:K.118, A:T.148, A:C.149, A:N.150, A:N.150 Water bridges: A:K.21, A:K.44 Salt bridges: A:K.21, A:K.44, A:K.44, A:D.120

1 x PO4: PHOSPHATE ION(Non-functional Binders)

PO4.2: 8 residues within 4Å: Chain A: K.17, N.18, K.21, K.44, Y.46, S.67, E.68 Ligands: GDP.1 9 PLIP interactions: 9 interactions with chain A Hydrogen bonds: A:N.18, A:S.67, A:S.67, A:E.68 Water bridges: A:K.21, A:K.44 Salt bridges: A:K.17, A:K.21, A:K.44

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Klosowiak, J.L. et al., Structural insights into Parkin substrate lysine targeting from minimal Miro substrates. Sci Rep (2016)

Release Date

2016-09-21

Peptides

Mitochondrial Rho GTPase 1: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

Mitochondrial Rho GTPase 1

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