- Coordinates
- PDB Format
- Method
- X-RAY DIFFRACTION 2.00 Å
- Oligo State
- homo-dimer
- Ligands
- 2 x HEM: PROTOPORPHYRIN IX CONTAINING FE(Non-covalent)
- 2 x NA: SODIUM ION(Non-functional Binders)
- 2 x CL: CHLORIDE ION(Non-functional Binders)
- 2 x OXY: OXYGEN MOLECULE(Non-covalent)
OXY.4: 5 residues within 4Å:- Chain A: R.88, X.91, H.92, D.121
- Ligands: HEM.1
3 PLIP interactions:3 interactions with chain A- Hydrogen bonds: A:R.88, A:R.88, A:H.92
OXY.11: 5 residues within 4Å:- Chain B: R.88, X.91, H.92, D.121
- Ligands: HEM.8
5 PLIP interactions:5 interactions with chain B- Hydrogen bonds: B:R.88, B:R.88
- Water bridges: B:H.92, B:D.121, B:D.121
- 7 x MPD: (4S)-2-METHYL-2,4-PENTANEDIOL(Non-functional Binders)
MPD.5: 3 residues within 4Å:- Chain A: D.63, P.134, I.135
1 PLIP interactions:1 interactions with chain A- Hydrogen bonds: A:P.134
MPD.6: 5 residues within 4Å:- Chain A: P.120, L.189, W.289, T.303, S.304
1 PLIP interactions:1 interactions with chain A- Hydrogen bonds: A:T.303
MPD.7: 9 residues within 4Å:- Chain A: P.609, E.610, Y.699, K.707, D.711
- Chain B: D.40, P.41, M.42, G.43
4 PLIP interactions:4 interactions with chain A- Hydrophobic interactions: A:E.610
- Hydrogen bonds: A:Y.699, A:Y.699, A:K.707
MPD.12: 2 residues within 4Å:- Chain B: R.486, E.509
1 PLIP interactions:1 interactions with chain B- Hydrogen bonds: B:E.509
MPD.13: 1 residues within 4Å:- Chain B: G.673
2 PLIP interactions:2 interactions with chain B- Hydrogen bonds: B:R.668
- Water bridges: B:R.668
MPD.14: 6 residues within 4Å:- Chain B: P.120, A.123, A.270, W.289, T.303, S.304
1 PLIP interactions:1 interactions with chain B- Hydrophobic interactions: B:A.123
MPD.15: 5 residues within 4Å:- Chain B: G.547, H.548, A.549, E.706, R.710
1 PLIP interactions:1 interactions with chain B- Hydrophobic interactions: B:H.548
- 1 x NIZ: pyridine-4-carbohydrazide(Non-covalent)
- Links
- RCSB PDBe PDBe-KB PDBj PDBsum CATH PLIP
- Citation
- Loewen, P.C., Structure of the W139F variant of the catalase-peroxidase from B. pseudomallei treated with isoniazid at 2 Angstroms. To be published
- Release Date
- 2017-07-12
- Peptides
- Catalase-peroxidase: AB
- SMTL:PDB
- SMTL Chain Id:
PDB Chain Id:A
AB
B
- Coordinates
- PDB Format
- Method
- X-RAY DIFFRACTION 2.00 Å
- Oligo State
- homo-dimer
- Ligands
- 2 x HEM: PROTOPORPHYRIN IX CONTAINING FE(Non-covalent)
- 2 x NA: SODIUM ION(Non-functional Binders)
- 2 x CL: CHLORIDE ION(Non-functional Binders)
- 2 x OXY: OXYGEN MOLECULE(Non-covalent)
- 7 x MPD: (4S)-2-METHYL-2,4-PENTANEDIOL(Non-functional Binders)
- 1 x NIZ: pyridine-4-carbohydrazide(Non-covalent)
- Links
- RCSB PDBe PDBe-KB PDBj PDBsum CATH PLIP
- Citation
- Loewen, P.C., Structure of the W139F variant of the catalase-peroxidase from B. pseudomallei treated with isoniazid at 2 Angstroms. To be published
- Release Date
- 2017-07-12
- Peptides
- Catalase-peroxidase: AB
- SMTL:PDB
- SMTL Chain Id:
PDB Chain Id:A
AB
B