SMTL ID : 5l7k.1 (1 other biounit)

The crystal structure of myristoylated NPHP3 peptide in complex with UNC119a

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 2.10 Å

Oligo State

monomer

Ligands

1 x GLY- THR- ALA- SER- SER- LEU: GLY-THR-ALA-SER-SER-LEU(Non-covalent)

GLY-THR-ALA-SER-SER-LEU.1: 20 residues within 4Å: Chain A: F.31, V.32, R.33, F.34, F.46, I.48, K.49, K.50, R.70, F.71, V.72, Y.74, M.104, E.106, S.161, Y.163, M.171, N.173, K.174 Ligands: MYR.2 12 PLIP interactions: 12 interactions with chain A Hydrophobic interactions: A:F.31, A:F.31, A:F.34, A:F.34, A:F.46, A:I.48 Hydrogen bonds: A:R.70, A:E.106, A:S.161, A:Y.163, A:N.173 Water bridges: A:E.106

1 x MYR: MYRISTIC ACID(Non-covalent)

MYR.2: 12 residues within 4Å: Chain A: F.34, V.72, Y.74, E.106, H.108, F.118, Y.137, F.139, Y.177 Ligands: GLY-THR-ALA-SER-SER-LEU.1, GLY-THR-ALA-SER-SER-LEU.1, GLY-THR-ALA-SER-SER-LEU.1 9 PLIP interactions: 9 interactions with chain A Hydrophobic interactions: A:F.34, A:Y.74, A:F.118, A:F.118, A:Y.137, A:Y.137, A:F.139, A:F.139 Hydrogen bonds: A:Y.74

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Jaiswal, M. et al., Novel Biochemical and Structural Insights into the Interaction of Myristoylated Cargo with Unc119 Protein and Their Release by Arl2/3. J.Biol.Chem. (2016)

Release Date

2016-08-10

Peptides

Protein unc-119 homolog A: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

Protein unc-119 homolog A

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