SMTL ID : 5lav.1

Novel Spiro[3H-indole-3,2 -pyrrolidin]-2(1H)-one Inhibitors of the MDM2-p53 Interaction: HDM2 (MDM2) in complex with compound 6b

Coordinates

PDB Format

Method

X-RAY DIFFRACTION 1.73 Å

Oligo State

monomer

Ligands

1 x 6SK: (3~{S},3'~{S},4'~{S})-4'-azanyl-6-chloranyl-3'-(3-chlorophenyl)-1'-(2,2-dimethylpropyl)spiro[1~{H}-indole-3,2'-pyrrolidine]-2-one(Non-covalent)

6SK.1: 12 residues within 4Å: Chain A: L.36, L.39, G.40, I.43, M.44, Y.49, F.68, F.73, V.75, H.78, I.81, Y.82 10 PLIP interactions: 10 interactions with chain A Hydrophobic interactions: A:L.36, A:L.36, A:L.39, A:Y.49, A:F.73, A:V.75, A:I.81 Hydrogen bonds: A:L.36, A:G.40 Halogen bonds: A:H.78

1 x SO4: SULFATE ION(Non-functional Binders)

SO4.2: 2 residues within 4Å: Chain A: P.2, A.3 1 PLIP interactions: 1 interactions with chain A Hydrogen bonds: A:A.3

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Gollner, A. et al., Discovery of Novel Spiro[3H-indole-3,2'-pyrrolidin]-2(1H)-one Compounds as Chemically Stable and Orally Active Inhibitors of the MDM2-p53 Interaction. J. Med. Chem. (2016)

Release Date

2016-11-02

Peptides

E3 ubiquitin-protein ligase Mdm2: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

E3 ubiquitin-protein ligase Mdm2