SMTL ID : 5lbd.2 (1 other biounit)

Crystal structure of the N-domain of HMA6, a copper-transporting P-type ATPase

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 1.50 Å

Oligo State

monomer

Ligands

1 x IOD: IODIDE ION(Non-functional Binders)

IOD.1: 4 residues within 4Å: Chain A: W.24, E.28, L.32, K.82 Ligand excluded by PLIP

2 x CL: CHLORIDE ION(Non-functional Binders)

CL.2: 4 residues within 4Å: Chain A: T.88, L.89, E.90 Ligands: NH4.6 Ligand excluded by PLIP CL.4: 5 residues within 4Å: Chain A: S.73, G.74, G.87, T.88, V.116 Ligand excluded by PLIP

2 x EDO: 1,2-ETHANEDIOL(Non-functional Binders)

EDO.3: 5 residues within 4Å: Chain A: V.6, V.7, A.47, K.50, A.51 1 PLIP interactions: 1 interactions with chain A Water bridges: A:V.7 EDO.5: 4 residues within 4Å: Chain A: W.24, N.80, N.81, K.82 3 PLIP interactions: 3 interactions with chain A Hydrogen bonds: A:K.82 Water bridges: A:N.81, A:D.121

1 x NH4: AMMONIUM ION(Non-functional Binders)

NH4.6: 4 residues within 4Å: Chain A: T.88, L.89, Y.117 Ligands: CL.2 2 PLIP interactions: 2 interactions with chain A Hydrogen bonds: A:L.89 Water bridges: A:G.87

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Mayerhofer, H. et al., Structural Insights into the Nucleotide-Binding Domains of the P1B-type ATPases HMA6 and HMA8 from Arabidopsis thaliana. PLoS ONE (2016)

Release Date

2017-08-02

Peptides

Copper-transporting ATPase PAA1, chloroplastic: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
B

Copper-transporting ATPase PAA1, chloroplastic

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