SMTL ID : 5lbn.1

High-resolution crystal structure of the UBC core domain of UBE2E1/UbcH6

Coordinates

PDB Format

Method

X-RAY DIFFRACTION 1.42 Å

Oligo State

monomer

Ligands

2 x GOL: GLYCEROL(Non-functional Binders)

GOL.1: 4 residues within 4Å: Chain A: S.33, R.45, S.46, T.47 6 PLIP interactions: 6 interactions with chain A Hydrogen bonds: A:R.45, A:S.46, A:T.47, A:T.47 Water bridges: A:P.36, A:K.37 GOL.2: 7 residues within 4Å: Chain A: P.76, K.77, V.78, T.79, V.94, I.95, L.100 5 PLIP interactions: 5 interactions with chain A Hydrogen bonds: A:P.76, A:V.78, A:G.93, A:I.95, A:I.95

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Anandapadamanaban, M. et al., Structure of a TRIM21 - UBE2E1 complex reveals the specificity of E2 and ubiquitin recognition by TRIM E3 RINGs. To Be Published

Release Date

2018-02-14

Peptides

Ubiquitin-conjugating enzyme E2 E1: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

Ubiquitin-conjugating enzyme E2 E1

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