- Coordinates
- PDB Format
- Method
- X-RAY DIFFRACTION 1.40 Å
- Oligo State
- homo-dimer
- Ligands
- 2 x FAD: FLAVIN-ADENINE DINUCLEOTIDE(Non-covalent)
- 2 x 6T3: 11-(2-pyrrolidin-1-yl-ethoxy)-14,19-dioxa-5,7,26-triaza-tetracyclo[19.3.1.1(2,6).1(8,12)]heptacosa-1(25),2(26),3,5,8,10,12(27),16,21,23-decaene(Non-covalent)
6T3.2: 13 residues within 4Å:- Chain A: F.127, I.129, G.175, F.179
- Chain B: W.106, F.107, G.150, G.151, M.155, N.162, E.194, I.195
- Ligands: FAD.6
9 PLIP interactions:5 interactions with chain B, 4 interactions with chain A- Hydrophobic interactions: B:W.106, B:F.107, B:I.195, A:F.127, A:I.129
- Hydrogen bonds: B:N.162
- pi-Stacking: B:W.106, A:F.179
- Water bridges: A:Q.123
6T3.7: 14 residues within 4Å:- Chain A: W.106, F.107, G.150, G.151, M.155, Y.156, N.162, E.194
- Chain B: F.127, I.129, F.132, G.175, F.179
- Ligands: FAD.1
6 PLIP interactions:4 interactions with chain A, 2 interactions with chain B- Hydrophobic interactions: A:W.106, A:F.107, B:F.132
- Hydrogen bonds: A:N.162
- pi-Stacking: A:W.106, B:F.179
- 4 x SO4: SULFATE ION(Non-functional Binders)
SO4.3: 3 residues within 4Å:- Chain A: V.70, H.73, Q.123
7 PLIP interactions:7 interactions with chain A- Water bridges: A:H.73, A:E.74, A:Q.123, A:Q.123, A:Q.123, A:Q.123
- Salt bridges: A:H.73
SO4.4: 4 residues within 4Å:- Chain A: P.222, T.224, H.226, W.227
2 PLIP interactions:2 interactions with chain A- Hydrogen bonds: A:T.224
- Salt bridges: A:H.226
SO4.8: 4 residues within 4Å:- Chain A: N.46, E.48, R.50
- Chain B: R.50
3 PLIP interactions:2 interactions with chain A, 1 interactions with chain B- Hydrogen bonds: A:N.46
- Salt bridges: A:R.50, B:R.50
SO4.9: 1 residues within 4Å:- Chain B: R.166
4 PLIP interactions:4 interactions with chain B- Water bridges: B:S.165, B:R.166, B:R.166
- Salt bridges: B:R.166
- 2 x ZN: ZINC ION(Non-covalent)
ZN.5: 3 residues within 4Å:- Chain A: H.174, H.178, C.223
4 PLIP interactions:4 interactions with chain A- Metal complexes: A:H.174, A:H.178, A:C.223, A:C.223
ZN.10: 3 residues within 4Å:- Chain B: H.174, H.178, C.223
4 PLIP interactions:4 interactions with chain B- Metal complexes: B:H.174, B:H.178, B:C.223, B:C.223
- Links
- RCSB PDBe PDBe-KB PDBj PDBsum CATH PLIP
- Citation
- Klaeger, S. et al., The target landscape of clinical kinase drugs. Science (2017)
- Release Date
- 2017-11-29
- Peptides
- Ribosyldihydronicotinamide dehydrogenase [quinone]: AB
- SMTL:PDB
- SMTL Chain Id:
PDB Chain Id:A
AB
B
- Coordinates
- PDB Format
- Method
- X-RAY DIFFRACTION 1.40 Å
- Oligo State
- homo-dimer
- Ligands
- 2 x FAD: FLAVIN-ADENINE DINUCLEOTIDE(Non-covalent)
- 2 x 6T3: 11-(2-pyrrolidin-1-yl-ethoxy)-14,19-dioxa-5,7,26-triaza-tetracyclo[19.3.1.1(2,6).1(8,12)]heptacosa-1(25),2(26),3,5,8,10,12(27),16,21,23-decaene(Non-covalent)
- 4 x SO4: SULFATE ION(Non-functional Binders)
- 2 x ZN: ZINC ION(Non-covalent)
- Links
- RCSB PDBe PDBe-KB PDBj PDBsum CATH PLIP
- Citation
- Klaeger, S. et al., The target landscape of clinical kinase drugs. Science (2017)
- Release Date
- 2017-11-29
- Peptides
- Ribosyldihydronicotinamide dehydrogenase [quinone]: AB
- SMTL:PDB
- SMTL Chain Id:
PDB Chain Id:A
AB
B