SMTL ID : 5lda.1

Structure of deubiquitinating enzyme homolog (Pyrococcus furiosus JAMM1) in complex with ubiquitin-like SAMP2.

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 1.90 Å

Oligo State

hetero-1-1-mer

Ligands

1 x ZN: ZINC ION(Non-covalent)

ZN.1: 6 residues within 4Å: Chain A: H.78, H.80, S.88, D.91, I.104 Chain B: G.69 4 PLIP interactions: 4 interactions with chain A Metal complexes: A:H.78, A:H.80, A:D.91, A:D.91

1 x GOL: GLYCEROL(Non-functional Binders)

GOL.2: 8 residues within 4Å: Chain A: L.60, L.63, E.64, E.67 Chain B: I.9, K.42, E.61, I.63 2 PLIP interactions: 1 interactions with chain B, 1 interactions with chain A Hydrogen bonds: B:K.42, A:E.64

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Cao, S. et al., Structural Insight into Ubiquitin-Like Protein Recognition and Oligomeric States of JAMM/MPN(+) Proteases. Structure (2017)

Release Date

2017-06-21

Peptides

JAMM1: A
SAMP2: B

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
B

JAMM1

SAMP2