SMTL ID : 5le9.1

Crystal structure of DARPin-DARPin rigid fusion, variant DD_Off7_09_3G124

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 1.85 Å

Oligo State

monomer

Ligands

7 x ACT: ACETATE ION(Non-functional Binders)

ACT.1: 6 residues within 4Å: Chain A: E.130, K.134, L.165, L.169, L.172, L.188 No protein-ligand interaction detected (PLIP) ACT.2: 1 residues within 4Å: Chain A: L.172 No protein-ligand interaction detected (PLIP) ACT.3: 6 residues within 4Å: Chain A: Y.81, H.85, L.86, Y.89, W.90, L.119 4 PLIP interactions: 4 interactions with chain A Hydrophobic interactions: A:Y.81, A:L.86, A:Y.89 Hydrogen bonds: A:W.90 ACT.4: 4 residues within 4Å: Chain A: D.138, V.139, S.140, K.190 1 PLIP interactions: 1 interactions with chain A Water bridges: A:V.139 ACT.5: 5 residues within 4Å: Chain A: G.279, H.280, L.281, E.282, I.283 3 PLIP interactions: 3 interactions with chain A Hydrophobic interactions: A:E.282 Hydrogen bonds: A:L.281 Water bridges: A:E.282 ACT.6: 5 residues within 4Å: Chain A: T.48, H.52, L.53, Y.56, L.86 2 PLIP interactions: 2 interactions with chain A Hydrophobic interactions: A:L.53 Water bridges: A:D.77 ACT.7: 4 residues within 4Å: Chain A: H.8, H.9, H.10, G.11 No protein-ligand interaction detected (PLIP)

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Wu, Y. et al., Rigidly connected multispecific artificial binders with adjustable geometries. Sci Rep (2017)

Release Date

2017-08-02

Peptides

DD_Off7_09_3G124: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

DD_Off7_09_3G124