SMTL ID : 5lg2.1

Horse L type ferritin iron loaded for 60 minutes

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 2.22 Å

Oligo State

homo-24-mer

Ligands

72 x CD: CADMIUM ION(Non-covalent)

CD.1: 1 residues within 4Å: Chain A: D.79 Ligand excluded by PLIP CD.2: 1 residues within 4Å: Chain A: E.10 Ligand excluded by PLIP CD.3: 5 residues within 4Å: Chain A: E.129 Chain F: E.129 Chain L: E.129 Ligands: CD.63, CD.135 Ligand excluded by PLIP CD.13: 1 residues within 4Å: Chain B: D.79 Ligand excluded by PLIP CD.14: 1 residues within 4Å: Chain B: E.10 Ligand excluded by PLIP CD.15: 5 residues within 4Å: Chain B: E.129 Chain H: E.129 Chain I: E.129 Ligands: CD.87, CD.99 Ligand excluded by PLIP CD.25: 1 residues within 4Å: Chain C: D.79 Ligand excluded by PLIP CD.26: 1 residues within 4Å: Chain C: E.10 Ligand excluded by PLIP CD.27: 5 residues within 4Å: Chain C: E.129 Chain G: E.129 Chain K: E.129 Ligands: CD.75, CD.123 Ligand excluded by PLIP CD.37: 1 residues within 4Å: Chain D: D.79 Ligand excluded by PLIP CD.38: 1 residues within 4Å: Chain D: E.10 Ligand excluded by PLIP CD.39: 5 residues within 4Å: Chain D: E.129 Chain E: E.129 Chain J: E.129 Ligands: CD.51, CD.111 Ligand excluded by PLIP CD.49: 1 residues within 4Å: Chain E: D.79 Ligand excluded by PLIP CD.50: 1 residues within 4Å: Chain E: E.10 Ligand excluded by PLIP CD.51: 5 residues within 4Å: Chain D: E.129 Chain E: E.129 Chain J: E.129 Ligands: CD.39, CD.111 Ligand excluded by PLIP CD.61: 1 residues within 4Å: Chain F: D.79 Ligand excluded by PLIP CD.62: 1 residues within 4Å: Chain F: E.10 Ligand excluded by PLIP CD.63: 5 residues within 4Å: Chain A: E.129 Chain F: E.129 Chain L: E.129 Ligands: CD.3, CD.135 Ligand excluded by PLIP CD.73: 1 residues within 4Å: Chain G: D.79 Ligand excluded by PLIP CD.74: 1 residues within 4Å: Chain G: E.10 Ligand excluded by PLIP CD.75: 5 residues within 4Å: Chain C: E.129 Chain G: E.129 Chain K: E.129 Ligands: CD.27, CD.123 Ligand excluded by PLIP CD.85: 1 residues within 4Å: Chain H: D.79 Ligand excluded by PLIP CD.86: 1 residues within 4Å: Chain H: E.10 Ligand excluded by PLIP CD.87: 5 residues within 4Å: Chain B: E.129 Chain H: E.129 Chain I: E.129 Ligands: CD.15, CD.99 Ligand excluded by PLIP CD.97: 1 residues within 4Å: Chain I: D.79 Ligand excluded by PLIP CD.98: 1 residues within 4Å: Chain I: E.10 Ligand excluded by PLIP CD.99: 5 residues within 4Å: Chain B: E.129 Chain H: E.129 Chain I: E.129 Ligands: CD.15, CD.87 Ligand excluded by PLIP CD.109: 1 residues within 4Å: Chain J: D.79 Ligand excluded by PLIP CD.110: 1 residues within 4Å: Chain J: E.10 Ligand excluded by PLIP CD.111: 5 residues within 4Å: Chain D: E.129 Chain E: E.129 Chain J: E.129 Ligands: CD.39, CD.51 Ligand excluded by PLIP CD.121: 1 residues within 4Å: Chain K: D.79 Ligand excluded by PLIP CD.122: 1 residues within 4Å: Chain K: E.10 Ligand excluded by PLIP CD.123: 5 residues within 4Å: Chain C: E.129 Chain G: E.129 Chain K: E.129 Ligands: CD.27, CD.75 Ligand excluded by PLIP CD.133: 1 residues within 4Å: Chain L: D.79 Ligand excluded by PLIP CD.134: 1 residues within 4Å: Chain L: E.10 Ligand excluded by PLIP CD.135: 5 residues within 4Å: Chain A: E.129 Chain F: E.129 Chain L: E.129 Ligands: CD.3, CD.63 Ligand excluded by PLIP CD.145: 1 residues within 4Å: Chain M: D.79 Ligand excluded by PLIP CD.146: 1 residues within 4Å: Chain M: E.10 Ligand excluded by PLIP CD.147: 5 residues within 4Å: Chain M: E.129 Chain R: E.129 Chain X: E.129 Ligands: CD.207, CD.279 Ligand excluded by PLIP CD.157: 1 residues within 4Å: Chain N: D.79 Ligand excluded by PLIP CD.158: 1 residues within 4Å: Chain N: E.10 Ligand excluded by PLIP CD.159: 5 residues within 4Å: Chain N: E.129 Chain T: E.129 Chain U: E.129 Ligands: CD.231, CD.243 Ligand excluded by PLIP CD.169: 1 residues within 4Å: Chain O: D.79 Ligand excluded by PLIP CD.170: 1 residues within 4Å: Chain O: E.10 Ligand excluded by PLIP CD.171: 5 residues within 4Å: Chain O: E.129 Chain S: E.129 Chain W: E.129 Ligands: CD.219, CD.267 Ligand excluded by PLIP CD.181: 1 residues within 4Å: Chain P: D.79 Ligand excluded by PLIP CD.182: 1 residues within 4Å: Chain P: E.10 Ligand excluded by PLIP CD.183: 5 residues within 4Å: Chain P: E.129 Chain Q: E.129 Chain V: E.129 Ligands: CD.195, CD.255 Ligand excluded by PLIP CD.193: 1 residues within 4Å: Chain Q: D.79 Ligand excluded by PLIP CD.194: 1 residues within 4Å: Chain Q: E.10 Ligand excluded by PLIP CD.195: 5 residues within 4Å: Chain P: E.129 Chain Q: E.129 Chain V: E.129 Ligands: CD.183, CD.255 Ligand excluded by PLIP CD.205: 1 residues within 4Å: Chain R: D.79 Ligand excluded by PLIP CD.206: 1 residues within 4Å: Chain R: E.10 Ligand excluded by PLIP CD.207: 5 residues within 4Å: Chain M: E.129 Chain R: E.129 Chain X: E.129 Ligands: CD.147, CD.279 Ligand excluded by PLIP CD.217: 1 residues within 4Å: Chain S: D.79 Ligand excluded by PLIP CD.218: 1 residues within 4Å: Chain S: E.10 Ligand excluded by PLIP CD.219: 5 residues within 4Å: Chain O: E.129 Chain S: E.129 Chain W: E.129 Ligands: CD.171, CD.267 Ligand excluded by PLIP CD.229: 1 residues within 4Å: Chain T: D.79 Ligand excluded by PLIP CD.230: 1 residues within 4Å: Chain T: E.10 Ligand excluded by PLIP CD.231: 5 residues within 4Å: Chain N: E.129 Chain T: E.129 Chain U: E.129 Ligands: CD.159, CD.243 Ligand excluded by PLIP CD.241: 1 residues within 4Å: Chain U: D.79 Ligand excluded by PLIP CD.242: 1 residues within 4Å: Chain U: E.10 Ligand excluded by PLIP CD.243: 5 residues within 4Å: Chain N: E.129 Chain T: E.129 Chain U: E.129 Ligands: CD.159, CD.231 Ligand excluded by PLIP CD.253: 1 residues within 4Å: Chain V: D.79 Ligand excluded by PLIP CD.254: 1 residues within 4Å: Chain V: E.10 Ligand excluded by PLIP CD.255: 5 residues within 4Å: Chain P: E.129 Chain Q: E.129 Chain V: E.129 Ligands: CD.183, CD.195 Ligand excluded by PLIP CD.265: 1 residues within 4Å: Chain W: D.79 Ligand excluded by PLIP CD.266: 1 residues within 4Å: Chain W: E.10 Ligand excluded by PLIP CD.267: 5 residues within 4Å: Chain O: E.129 Chain S: E.129 Chain W: E.129 Ligands: CD.171, CD.219 Ligand excluded by PLIP CD.277: 1 residues within 4Å: Chain X: D.79 Ligand excluded by PLIP CD.278: 1 residues within 4Å: Chain X: E.10 Ligand excluded by PLIP CD.279: 5 residues within 4Å: Chain M: E.129 Chain R: E.129 Chain X: E.129 Ligands: CD.147, CD.207 Ligand excluded by PLIP

96 x FE: FE (III) ION(Non-covalent)

FE.4: 7 residues within 4Å: Chain A: E.56, E.59 Ligands: FE.5, FE.6, OXY.9, PER.10, PER.11 3 PLIP interactions: 3 interactions with chain A Metal complexes: A:E.56, A:E.56, A:E.59 FE.5: 6 residues within 4Å: Chain A: E.55, E.59 Ligands: FE.4, FE.6, OXY.9, PER.11 2 PLIP interactions: 2 interactions with chain A Metal complexes: A:E.55, A:E.59 FE.6: 7 residues within 4Å: Chain A: E.52, E.55, E.56 Ligands: FE.4, FE.5, OXY.9, PER.10 3 PLIP interactions: 3 interactions with chain A Metal complexes: A:E.52, A:E.55, A:E.56 FE.7: 2 residues within 4Å: Chain A: E.52, E.55 2 PLIP interactions: 2 interactions with chain A Metal complexes: A:E.52, A:E.55 FE.16: 7 residues within 4Å: Chain B: E.56, E.59 Ligands: FE.17, FE.18, OXY.21, PER.22, PER.23 3 PLIP interactions: 3 interactions with chain B Metal complexes: B:E.56, B:E.56, B:E.59 FE.17: 6 residues within 4Å: Chain B: E.55, E.59 Ligands: FE.16, FE.18, OXY.21, PER.23 2 PLIP interactions: 2 interactions with chain B Metal complexes: B:E.55, B:E.59 FE.18: 7 residues within 4Å: Chain B: E.52, E.55, E.56 Ligands: FE.16, FE.17, OXY.21, PER.22 3 PLIP interactions: 3 interactions with chain B Metal complexes: B:E.52, B:E.55, B:E.56 FE.19: 2 residues within 4Å: Chain B: E.52, E.55 2 PLIP interactions: 2 interactions with chain B Metal complexes: B:E.52, B:E.55 FE.28: 7 residues within 4Å: Chain C: E.56, E.59 Ligands: FE.29, FE.30, OXY.33, PER.34, PER.35 3 PLIP interactions: 3 interactions with chain C Metal complexes: C:E.56, C:E.56, C:E.59 FE.29: 6 residues within 4Å: Chain C: E.55, E.59 Ligands: FE.28, FE.30, OXY.33, PER.35 2 PLIP interactions: 2 interactions with chain C Metal complexes: C:E.55, C:E.59 FE.30: 7 residues within 4Å: Chain C: E.52, E.55, E.56 Ligands: FE.28, FE.29, OXY.33, PER.34 3 PLIP interactions: 3 interactions with chain C Metal complexes: C:E.52, C:E.55, C:E.56 FE.31: 2 residues within 4Å: Chain C: E.52, E.55 2 PLIP interactions: 2 interactions with chain C Metal complexes: C:E.52, C:E.55 FE.40: 7 residues within 4Å: Chain D: E.56, E.59 Ligands: FE.41, FE.42, OXY.45, PER.46, PER.47 3 PLIP interactions: 3 interactions with chain D Metal complexes: D:E.56, D:E.56, D:E.59 FE.41: 6 residues within 4Å: Chain D: E.55, E.59 Ligands: FE.40, FE.42, OXY.45, PER.47 2 PLIP interactions: 2 interactions with chain D Metal complexes: D:E.55, D:E.59 FE.42: 7 residues within 4Å: Chain D: E.52, E.55, E.56 Ligands: FE.40, FE.41, OXY.45, PER.46 3 PLIP interactions: 3 interactions with chain D Metal complexes: D:E.52, D:E.55, D:E.56 FE.43: 2 residues within 4Å: Chain D: E.52, E.55 2 PLIP interactions: 2 interactions with chain D Metal complexes: D:E.52, D:E.55 FE.52: 7 residues within 4Å: Chain E: E.56, E.59 Ligands: FE.53, FE.54, OXY.57, PER.58, PER.59 3 PLIP interactions: 3 interactions with chain E Metal complexes: E:E.56, E:E.56, E:E.59 FE.53: 6 residues within 4Å: Chain E: E.55, E.59 Ligands: FE.52, FE.54, OXY.57, PER.59 2 PLIP interactions: 2 interactions with chain E Metal complexes: E:E.55, E:E.59 FE.54: 7 residues within 4Å: Chain E: E.52, E.55, E.56 Ligands: FE.52, FE.53, OXY.57, PER.58 3 PLIP interactions: 3 interactions with chain E Metal complexes: E:E.52, E:E.55, E:E.56 FE.55: 2 residues within 4Å: Chain E: E.52, E.55 2 PLIP interactions: 2 interactions with chain E Metal complexes: E:E.52, E:E.55 FE.64: 7 residues within 4Å: Chain F: E.56, E.59 Ligands: FE.65, FE.66, OXY.69, PER.70, PER.71 3 PLIP interactions: 3 interactions with chain F Metal complexes: F:E.56, F:E.56, F:E.59 FE.65: 6 residues within 4Å: Chain F: E.55, E.59 Ligands: FE.64, FE.66, OXY.69, PER.71 2 PLIP interactions: 2 interactions with chain F Metal complexes: F:E.55, F:E.59 FE.66: 7 residues within 4Å: Chain F: E.52, E.55, E.56 Ligands: FE.64, FE.65, OXY.69, PER.70 3 PLIP interactions: 3 interactions with chain F Metal complexes: F:E.52, F:E.55, F:E.56 FE.67: 2 residues within 4Å: Chain F: E.52, E.55 2 PLIP interactions: 2 interactions with chain F Metal complexes: F:E.52, F:E.55 FE.76: 7 residues within 4Å: Chain G: E.56, E.59 Ligands: FE.77, FE.78, OXY.81, PER.82, PER.83 3 PLIP interactions: 3 interactions with chain G Metal complexes: G:E.56, G:E.56, G:E.59 FE.77: 6 residues within 4Å: Chain G: E.55, E.59 Ligands: FE.76, FE.78, OXY.81, PER.83 2 PLIP interactions: 2 interactions with chain G Metal complexes: G:E.55, G:E.59 FE.78: 7 residues within 4Å: Chain G: E.52, E.55, E.56 Ligands: FE.76, FE.77, OXY.81, PER.82 3 PLIP interactions: 3 interactions with chain G Metal complexes: G:E.52, G:E.55, G:E.56 FE.79: 2 residues within 4Å: Chain G: E.52, E.55 2 PLIP interactions: 2 interactions with chain G Metal complexes: G:E.52, G:E.55 FE.88: 7 residues within 4Å: Chain H: E.56, E.59 Ligands: FE.89, FE.90, OXY.93, PER.94, PER.95 3 PLIP interactions: 3 interactions with chain H Metal complexes: H:E.56, H:E.56, H:E.59 FE.89: 6 residues within 4Å: Chain H: E.55, E.59 Ligands: FE.88, FE.90, OXY.93, PER.95 2 PLIP interactions: 2 interactions with chain H Metal complexes: H:E.55, H:E.59 FE.90: 7 residues within 4Å: Chain H: E.52, E.55, E.56 Ligands: FE.88, FE.89, OXY.93, PER.94 3 PLIP interactions: 3 interactions with chain H Metal complexes: H:E.52, H:E.55, H:E.56 FE.91: 2 residues within 4Å: Chain H: E.52, E.55 2 PLIP interactions: 2 interactions with chain H Metal complexes: H:E.52, H:E.55 FE.100: 7 residues within 4Å: Chain I: E.56, E.59 Ligands: FE.101, FE.102, OXY.105, PER.106, PER.107 3 PLIP interactions: 3 interactions with chain I Metal complexes: I:E.56, I:E.56, I:E.59 FE.101: 6 residues within 4Å: Chain I: E.55, E.59 Ligands: FE.100, FE.102, OXY.105, PER.107 2 PLIP interactions: 2 interactions with chain I Metal complexes: I:E.55, I:E.59 FE.102: 7 residues within 4Å: Chain I: E.52, E.55, E.56 Ligands: FE.100, FE.101, OXY.105, PER.106 3 PLIP interactions: 3 interactions with chain I Metal complexes: I:E.52, I:E.55, I:E.56 FE.103: 2 residues within 4Å: Chain I: E.52, E.55 2 PLIP interactions: 2 interactions with chain I Metal complexes: I:E.52, I:E.55 FE.112: 7 residues within 4Å: Chain J: E.56, E.59 Ligands: FE.113, FE.114, OXY.117, PER.118, PER.119 3 PLIP interactions: 3 interactions with chain J Metal complexes: J:E.56, J:E.56, J:E.59 FE.113: 6 residues within 4Å: Chain J: E.55, E.59 Ligands: FE.112, FE.114, OXY.117, PER.119 2 PLIP interactions: 2 interactions with chain J Metal complexes: J:E.55, J:E.59 FE.114: 7 residues within 4Å: Chain J: E.52, E.55, E.56 Ligands: FE.112, FE.113, OXY.117, PER.118 3 PLIP interactions: 3 interactions with chain J Metal complexes: J:E.52, J:E.55, J:E.56 FE.115: 2 residues within 4Å: Chain J: E.52, E.55 2 PLIP interactions: 2 interactions with chain J Metal complexes: J:E.52, J:E.55 FE.124: 7 residues within 4Å: Chain K: E.56, E.59 Ligands: FE.125, FE.126, OXY.129, PER.130, PER.131 3 PLIP interactions: 3 interactions with chain K Metal complexes: K:E.56, K:E.56, K:E.59 FE.125: 6 residues within 4Å: Chain K: E.55, E.59 Ligands: FE.124, FE.126, OXY.129, PER.131 2 PLIP interactions: 2 interactions with chain K Metal complexes: K:E.55, K:E.59 FE.126: 7 residues within 4Å: Chain K: E.52, E.55, E.56 Ligands: FE.124, FE.125, OXY.129, PER.130 3 PLIP interactions: 3 interactions with chain K Metal complexes: K:E.52, K:E.55, K:E.56 FE.127: 2 residues within 4Å: Chain K: E.52, E.55 2 PLIP interactions: 2 interactions with chain K Metal complexes: K:E.52, K:E.55 FE.136: 7 residues within 4Å: Chain L: E.56, E.59 Ligands: FE.137, FE.138, OXY.141, PER.142, PER.143 3 PLIP interactions: 3 interactions with chain L Metal complexes: L:E.56, L:E.56, L:E.59 FE.137: 6 residues within 4Å: Chain L: E.55, E.59 Ligands: FE.136, FE.138, OXY.141, PER.143 2 PLIP interactions: 2 interactions with chain L Metal complexes: L:E.55, L:E.59 FE.138: 7 residues within 4Å: Chain L: E.52, E.55, E.56 Ligands: FE.136, FE.137, OXY.141, PER.142 3 PLIP interactions: 3 interactions with chain L Metal complexes: L:E.52, L:E.55, L:E.56 FE.139: 2 residues within 4Å: Chain L: E.52, E.55 2 PLIP interactions: 2 interactions with chain L Metal complexes: L:E.52, L:E.55 FE.148: 7 residues within 4Å: Chain M: E.56, E.59 Ligands: FE.149, FE.150, OXY.153, PER.154, PER.155 3 PLIP interactions: 3 interactions with chain M Metal complexes: M:E.56, M:E.56, M:E.59 FE.149: 6 residues within 4Å: Chain M: E.55, E.59 Ligands: FE.148, FE.150, OXY.153, PER.155 2 PLIP interactions: 2 interactions with chain M Metal complexes: M:E.55, M:E.59 FE.150: 7 residues within 4Å: Chain M: E.52, E.55, E.56 Ligands: FE.148, FE.149, OXY.153, PER.154 3 PLIP interactions: 3 interactions with chain M Metal complexes: M:E.52, M:E.55, M:E.56 FE.151: 2 residues within 4Å: Chain M: E.52, E.55 2 PLIP interactions: 2 interactions with chain M Metal complexes: M:E.52, M:E.55 FE.160: 7 residues within 4Å: Chain N: E.56, E.59 Ligands: FE.161, FE.162, OXY.165, PER.166, PER.167 3 PLIP interactions: 3 interactions with chain N Metal complexes: N:E.56, N:E.56, N:E.59 FE.161: 6 residues within 4Å: Chain N: E.55, E.59 Ligands: FE.160, FE.162, OXY.165, PER.167 2 PLIP interactions: 2 interactions with chain N Metal complexes: N:E.55, N:E.59 FE.162: 7 residues within 4Å: Chain N: E.52, E.55, E.56 Ligands: FE.160, FE.161, OXY.165, PER.166 3 PLIP interactions: 3 interactions with chain N Metal complexes: N:E.52, N:E.55, N:E.56 FE.163: 2 residues within 4Å: Chain N: E.52, E.55 2 PLIP interactions: 2 interactions with chain N Metal complexes: N:E.52, N:E.55 FE.172: 7 residues within 4Å: Chain O: E.56, E.59 Ligands: FE.173, FE.174, OXY.177, PER.178, PER.179 3 PLIP interactions: 3 interactions with chain O Metal complexes: O:E.56, O:E.56, O:E.59 FE.173: 6 residues within 4Å: Chain O: E.55, E.59 Ligands: FE.172, FE.174, OXY.177, PER.179 2 PLIP interactions: 2 interactions with chain O Metal complexes: O:E.55, O:E.59 FE.174: 7 residues within 4Å: Chain O: E.52, E.55, E.56 Ligands: FE.172, FE.173, OXY.177, PER.178 3 PLIP interactions: 3 interactions with chain O Metal complexes: O:E.52, O:E.55, O:E.56 FE.175: 2 residues within 4Å: Chain O: E.52, E.55 2 PLIP interactions: 2 interactions with chain O Metal complexes: O:E.52, O:E.55 FE.184: 7 residues within 4Å: Chain P: E.56, E.59 Ligands: FE.185, FE.186, OXY.189, PER.190, PER.191 3 PLIP interactions: 3 interactions with chain P Metal complexes: P:E.56, P:E.56, P:E.59 FE.185: 6 residues within 4Å: Chain P: E.55, E.59 Ligands: FE.184, FE.186, OXY.189, PER.191 2 PLIP interactions: 2 interactions with chain P Metal complexes: P:E.55, P:E.59 FE.186: 7 residues within 4Å: Chain P: E.52, E.55, E.56 Ligands: FE.184, FE.185, OXY.189, PER.190 3 PLIP interactions: 3 interactions with chain P Metal complexes: P:E.52, P:E.55, P:E.56 FE.187: 2 residues within 4Å: Chain P: E.52, E.55 2 PLIP interactions: 2 interactions with chain P Metal complexes: P:E.52, P:E.55 FE.196: 7 residues within 4Å: Chain Q: E.56, E.59 Ligands: FE.197, FE.198, OXY.201, PER.202, PER.203 3 PLIP interactions: 3 interactions with chain Q Metal complexes: Q:E.56, Q:E.56, Q:E.59 FE.197: 6 residues within 4Å: Chain Q: E.55, E.59 Ligands: FE.196, FE.198, OXY.201, PER.203 2 PLIP interactions: 2 interactions with chain Q Metal complexes: Q:E.55, Q:E.59 FE.198: 7 residues within 4Å: Chain Q: E.52, E.55, E.56 Ligands: FE.196, FE.197, OXY.201, PER.202 3 PLIP interactions: 3 interactions with chain Q Metal complexes: Q:E.52, Q:E.55, Q:E.56 FE.199: 2 residues within 4Å: Chain Q: E.52, E.55 2 PLIP interactions: 2 interactions with chain Q Metal complexes: Q:E.52, Q:E.55 FE.208: 7 residues within 4Å: Chain R: E.56, E.59 Ligands: FE.209, FE.210, OXY.213, PER.214, PER.215 3 PLIP interactions: 3 interactions with chain R Metal complexes: R:E.56, R:E.56, R:E.59 FE.209: 6 residues within 4Å: Chain R: E.55, E.59 Ligands: FE.208, FE.210, OXY.213, PER.215 2 PLIP interactions: 2 interactions with chain R Metal complexes: R:E.55, R:E.59 FE.210: 7 residues within 4Å: Chain R: E.52, E.55, E.56 Ligands: FE.208, FE.209, OXY.213, PER.214 3 PLIP interactions: 3 interactions with chain R Metal complexes: R:E.52, R:E.55, R:E.56 FE.211: 2 residues within 4Å: Chain R: E.52, E.55 2 PLIP interactions: 2 interactions with chain R Metal complexes: R:E.52, R:E.55 FE.220: 7 residues within 4Å: Chain S: E.56, E.59 Ligands: FE.221, FE.222, OXY.225, PER.226, PER.227 3 PLIP interactions: 3 interactions with chain S Metal complexes: S:E.56, S:E.56, S:E.59 FE.221: 6 residues within 4Å: Chain S: E.55, E.59 Ligands: FE.220, FE.222, OXY.225, PER.227 2 PLIP interactions: 2 interactions with chain S Metal complexes: S:E.55, S:E.59 FE.222: 7 residues within 4Å: Chain S: E.52, E.55, E.56 Ligands: FE.220, FE.221, OXY.225, PER.226 3 PLIP interactions: 3 interactions with chain S Metal complexes: S:E.52, S:E.55, S:E.56 FE.223: 2 residues within 4Å: Chain S: E.52, E.55 2 PLIP interactions: 2 interactions with chain S Metal complexes: S:E.52, S:E.55 FE.232: 7 residues within 4Å: Chain T: E.56, E.59 Ligands: FE.233, FE.234, OXY.237, PER.238, PER.239 3 PLIP interactions: 3 interactions with chain T Metal complexes: T:E.56, T:E.56, T:E.59 FE.233: 6 residues within 4Å: Chain T: E.55, E.59 Ligands: FE.232, FE.234, OXY.237, PER.239 2 PLIP interactions: 2 interactions with chain T Metal complexes: T:E.55, T:E.59 FE.234: 7 residues within 4Å: Chain T: E.52, E.55, E.56 Ligands: FE.232, FE.233, OXY.237, PER.238 3 PLIP interactions: 3 interactions with chain T Metal complexes: T:E.52, T:E.55, T:E.56 FE.235: 2 residues within 4Å: Chain T: E.52, E.55 2 PLIP interactions: 2 interactions with chain T Metal complexes: T:E.52, T:E.55 FE.244: 7 residues within 4Å: Chain U: E.56, E.59 Ligands: FE.245, FE.246, OXY.249, PER.250, PER.251 3 PLIP interactions: 3 interactions with chain U Metal complexes: U:E.56, U:E.56, U:E.59 FE.245: 6 residues within 4Å: Chain U: E.55, E.59 Ligands: FE.244, FE.246, OXY.249, PER.251 2 PLIP interactions: 2 interactions with chain U Metal complexes: U:E.55, U:E.59 FE.246: 7 residues within 4Å: Chain U: E.52, E.55, E.56 Ligands: FE.244, FE.245, OXY.249, PER.250 3 PLIP interactions: 3 interactions with chain U Metal complexes: U:E.52, U:E.55, U:E.56 FE.247: 2 residues within 4Å: Chain U: E.52, E.55 2 PLIP interactions: 2 interactions with chain U Metal complexes: U:E.52, U:E.55 FE.256: 7 residues within 4Å: Chain V: E.56, E.59 Ligands: FE.257, FE.258, OXY.261, PER.262, PER.263 3 PLIP interactions: 3 interactions with chain V Metal complexes: V:E.56, V:E.56, V:E.59 FE.257: 6 residues within 4Å: Chain V: E.55, E.59 Ligands: FE.256, FE.258, OXY.261, PER.263 2 PLIP interactions: 2 interactions with chain V Metal complexes: V:E.55, V:E.59 FE.258: 7 residues within 4Å: Chain V: E.52, E.55, E.56 Ligands: FE.256, FE.257, OXY.261, PER.262 3 PLIP interactions: 3 interactions with chain V Metal complexes: V:E.52, V:E.55, V:E.56 FE.259: 2 residues within 4Å: Chain V: E.52, E.55 2 PLIP interactions: 2 interactions with chain V Metal complexes: V:E.52, V:E.55 FE.268: 7 residues within 4Å: Chain W: E.56, E.59 Ligands: FE.269, FE.270, OXY.273, PER.274, PER.275 3 PLIP interactions: 3 interactions with chain W Metal complexes: W:E.56, W:E.56, W:E.59 FE.269: 6 residues within 4Å: Chain W: E.55, E.59 Ligands: FE.268, FE.270, OXY.273, PER.275 2 PLIP interactions: 2 interactions with chain W Metal complexes: W:E.55, W:E.59 FE.270: 7 residues within 4Å: Chain W: E.52, E.55, E.56 Ligands: FE.268, FE.269, OXY.273, PER.274 3 PLIP interactions: 3 interactions with chain W Metal complexes: W:E.52, W:E.55, W:E.56 FE.271: 2 residues within 4Å: Chain W: E.52, E.55 2 PLIP interactions: 2 interactions with chain W Metal complexes: W:E.52, W:E.55 FE.280: 7 residues within 4Å: Chain X: E.56, E.59 Ligands: FE.281, FE.282, OXY.285, PER.286, PER.287 3 PLIP interactions: 3 interactions with chain X Metal complexes: X:E.56, X:E.56, X:E.59 FE.281: 6 residues within 4Å: Chain X: E.55, E.59 Ligands: FE.280, FE.282, OXY.285, PER.287 2 PLIP interactions: 2 interactions with chain X Metal complexes: X:E.55, X:E.59 FE.282: 7 residues within 4Å: Chain X: E.52, E.55, E.56 Ligands: FE.280, FE.281, OXY.285, PER.286 3 PLIP interactions: 3 interactions with chain X Metal complexes: X:E.52, X:E.55, X:E.56 FE.283: 2 residues within 4Å: Chain X: E.52, E.55 2 PLIP interactions: 2 interactions with chain X Metal complexes: X:E.52, X:E.55

24 x CL: CHLORIDE ION(Non-functional Binders)

CL.8: 1 residues within 4Å: Chain A: N.6 Ligand excluded by PLIP CL.20: 1 residues within 4Å: Chain B: N.6 Ligand excluded by PLIP CL.32: 1 residues within 4Å: Chain C: N.6 Ligand excluded by PLIP CL.44: 1 residues within 4Å: Chain D: N.6 Ligand excluded by PLIP CL.56: 1 residues within 4Å: Chain E: N.6 Ligand excluded by PLIP CL.68: 1 residues within 4Å: Chain F: N.6 Ligand excluded by PLIP CL.80: 1 residues within 4Å: Chain G: N.6 Ligand excluded by PLIP CL.92: 1 residues within 4Å: Chain H: N.6 Ligand excluded by PLIP CL.104: 1 residues within 4Å: Chain I: N.6 Ligand excluded by PLIP CL.116: 1 residues within 4Å: Chain J: N.6 Ligand excluded by PLIP CL.128: 1 residues within 4Å: Chain K: N.6 Ligand excluded by PLIP CL.140: 1 residues within 4Å: Chain L: N.6 Ligand excluded by PLIP CL.152: 1 residues within 4Å: Chain M: N.6 Ligand excluded by PLIP CL.164: 1 residues within 4Å: Chain N: N.6 Ligand excluded by PLIP CL.176: 1 residues within 4Å: Chain O: N.6 Ligand excluded by PLIP CL.188: 1 residues within 4Å: Chain P: N.6 Ligand excluded by PLIP CL.200: 1 residues within 4Å: Chain Q: N.6 Ligand excluded by PLIP CL.212: 1 residues within 4Å: Chain R: N.6 Ligand excluded by PLIP CL.224: 1 residues within 4Å: Chain S: N.6 Ligand excluded by PLIP CL.236: 1 residues within 4Å: Chain T: N.6 Ligand excluded by PLIP CL.248: 1 residues within 4Å: Chain U: N.6 Ligand excluded by PLIP CL.260: 1 residues within 4Å: Chain V: N.6 Ligand excluded by PLIP CL.272: 1 residues within 4Å: Chain W: N.6 Ligand excluded by PLIP CL.284: 1 residues within 4Å: Chain X: N.6 Ligand excluded by PLIP

24 x OXY: OXYGEN MOLECULE(Non-covalent)

OXY.9: 8 residues within 4Å: Chain A: E.55, E.56, E.59 Ligands: FE.4, FE.5, FE.6, PER.10, PER.11 No protein-ligand interaction detected (PLIP) OXY.21: 8 residues within 4Å: Chain B: E.55, E.56, E.59 Ligands: FE.16, FE.17, FE.18, PER.22, PER.23 No protein-ligand interaction detected (PLIP) OXY.33: 8 residues within 4Å: Chain C: E.55, E.56, E.59 Ligands: FE.28, FE.29, FE.30, PER.34, PER.35 No protein-ligand interaction detected (PLIP) OXY.45: 8 residues within 4Å: Chain D: E.55, E.56, E.59 Ligands: FE.40, FE.41, FE.42, PER.46, PER.47 No protein-ligand interaction detected (PLIP) OXY.57: 8 residues within 4Å: Chain E: E.55, E.56, E.59 Ligands: FE.52, FE.53, FE.54, PER.58, PER.59 No protein-ligand interaction detected (PLIP) OXY.69: 8 residues within 4Å: Chain F: E.55, E.56, E.59 Ligands: FE.64, FE.65, FE.66, PER.70, PER.71 No protein-ligand interaction detected (PLIP) OXY.81: 8 residues within 4Å: Chain G: E.55, E.56, E.59 Ligands: FE.76, FE.77, FE.78, PER.82, PER.83 No protein-ligand interaction detected (PLIP) OXY.93: 8 residues within 4Å: Chain H: E.55, E.56, E.59 Ligands: FE.88, FE.89, FE.90, PER.94, PER.95 No protein-ligand interaction detected (PLIP) OXY.105: 8 residues within 4Å: Chain I: E.55, E.56, E.59 Ligands: FE.100, FE.101, FE.102, PER.106, PER.107 No protein-ligand interaction detected (PLIP) OXY.117: 8 residues within 4Å: Chain J: E.55, E.56, E.59 Ligands: FE.112, FE.113, FE.114, PER.118, PER.119 No protein-ligand interaction detected (PLIP) OXY.129: 8 residues within 4Å: Chain K: E.55, E.56, E.59 Ligands: FE.124, FE.125, FE.126, PER.130, PER.131 No protein-ligand interaction detected (PLIP) OXY.141: 8 residues within 4Å: Chain L: E.55, E.56, E.59 Ligands: FE.136, FE.137, FE.138, PER.142, PER.143 No protein-ligand interaction detected (PLIP) OXY.153: 8 residues within 4Å: Chain M: E.55, E.56, E.59 Ligands: FE.148, FE.149, FE.150, PER.154, PER.155 No protein-ligand interaction detected (PLIP) OXY.165: 8 residues within 4Å: Chain N: E.55, E.56, E.59 Ligands: FE.160, FE.161, FE.162, PER.166, PER.167 No protein-ligand interaction detected (PLIP) OXY.177: 8 residues within 4Å: Chain O: E.55, E.56, E.59 Ligands: FE.172, FE.173, FE.174, PER.178, PER.179 No protein-ligand interaction detected (PLIP) OXY.189: 8 residues within 4Å: Chain P: E.55, E.56, E.59 Ligands: FE.184, FE.185, FE.186, PER.190, PER.191 No protein-ligand interaction detected (PLIP) OXY.201: 8 residues within 4Å: Chain Q: E.55, E.56, E.59 Ligands: FE.196, FE.197, FE.198, PER.202, PER.203 No protein-ligand interaction detected (PLIP) OXY.213: 8 residues within 4Å: Chain R: E.55, E.56, E.59 Ligands: FE.208, FE.209, FE.210, PER.214, PER.215 No protein-ligand interaction detected (PLIP) OXY.225: 8 residues within 4Å: Chain S: E.55, E.56, E.59 Ligands: FE.220, FE.221, FE.222, PER.226, PER.227 No protein-ligand interaction detected (PLIP) OXY.237: 8 residues within 4Å: Chain T: E.55, E.56, E.59 Ligands: FE.232, FE.233, FE.234, PER.238, PER.239 No protein-ligand interaction detected (PLIP) OXY.249: 8 residues within 4Å: Chain U: E.55, E.56, E.59 Ligands: FE.244, FE.245, FE.246, PER.250, PER.251 No protein-ligand interaction detected (PLIP) OXY.261: 8 residues within 4Å: Chain V: E.55, E.56, E.59 Ligands: FE.256, FE.257, FE.258, PER.262, PER.263 No protein-ligand interaction detected (PLIP) OXY.273: 8 residues within 4Å: Chain W: E.55, E.56, E.59 Ligands: FE.268, FE.269, FE.270, PER.274, PER.275 No protein-ligand interaction detected (PLIP) OXY.285: 8 residues within 4Å: Chain X: E.55, E.56, E.59 Ligands: FE.280, FE.281, FE.282, PER.286, PER.287 No protein-ligand interaction detected (PLIP)

48 x PER: PEROXIDE ION(Non-covalent)

PER.10: 6 residues within 4Å: Chain A: E.52, E.56 Ligands: FE.4, FE.6, OXY.9, PER.11 Ligand excluded by PLIP PER.11: 5 residues within 4Å: Chain A: E.59 Ligands: FE.4, FE.5, OXY.9, PER.10 Ligand excluded by PLIP PER.22: 6 residues within 4Å: Chain B: E.52, E.56 Ligands: FE.16, FE.18, OXY.21, PER.23 Ligand excluded by PLIP PER.23: 5 residues within 4Å: Chain B: E.59 Ligands: FE.16, FE.17, OXY.21, PER.22 Ligand excluded by PLIP PER.34: 6 residues within 4Å: Chain C: E.52, E.56 Ligands: FE.28, FE.30, OXY.33, PER.35 Ligand excluded by PLIP PER.35: 5 residues within 4Å: Chain C: E.59 Ligands: FE.28, FE.29, OXY.33, PER.34 Ligand excluded by PLIP PER.46: 6 residues within 4Å: Chain D: E.52, E.56 Ligands: FE.40, FE.42, OXY.45, PER.47 Ligand excluded by PLIP PER.47: 5 residues within 4Å: Chain D: E.59 Ligands: FE.40, FE.41, OXY.45, PER.46 Ligand excluded by PLIP PER.58: 6 residues within 4Å: Chain E: E.52, E.56 Ligands: FE.52, FE.54, OXY.57, PER.59 Ligand excluded by PLIP PER.59: 5 residues within 4Å: Chain E: E.59 Ligands: FE.52, FE.53, OXY.57, PER.58 Ligand excluded by PLIP PER.70: 6 residues within 4Å: Chain F: E.52, E.56 Ligands: FE.64, FE.66, OXY.69, PER.71 Ligand excluded by PLIP PER.71: 5 residues within 4Å: Chain F: E.59 Ligands: FE.64, FE.65, OXY.69, PER.70 Ligand excluded by PLIP PER.82: 6 residues within 4Å: Chain G: E.52, E.56 Ligands: FE.76, FE.78, OXY.81, PER.83 Ligand excluded by PLIP PER.83: 5 residues within 4Å: Chain G: E.59 Ligands: FE.76, FE.77, OXY.81, PER.82 Ligand excluded by PLIP PER.94: 6 residues within 4Å: Chain H: E.52, E.56 Ligands: FE.88, FE.90, OXY.93, PER.95 Ligand excluded by PLIP PER.95: 5 residues within 4Å: Chain H: E.59 Ligands: FE.88, FE.89, OXY.93, PER.94 Ligand excluded by PLIP PER.106: 6 residues within 4Å: Chain I: E.52, E.56 Ligands: FE.100, FE.102, OXY.105, PER.107 Ligand excluded by PLIP PER.107: 5 residues within 4Å: Chain I: E.59 Ligands: FE.100, FE.101, OXY.105, PER.106 Ligand excluded by PLIP PER.118: 6 residues within 4Å: Chain J: E.52, E.56 Ligands: FE.112, FE.114, OXY.117, PER.119 Ligand excluded by PLIP PER.119: 5 residues within 4Å: Chain J: E.59 Ligands: FE.112, FE.113, OXY.117, PER.118 Ligand excluded by PLIP PER.130: 6 residues within 4Å: Chain K: E.52, E.56 Ligands: FE.124, FE.126, OXY.129, PER.131 Ligand excluded by PLIP PER.131: 5 residues within 4Å: Chain K: E.59 Ligands: FE.124, FE.125, OXY.129, PER.130 Ligand excluded by PLIP PER.142: 6 residues within 4Å: Chain L: E.52, E.56 Ligands: FE.136, FE.138, OXY.141, PER.143 Ligand excluded by PLIP PER.143: 5 residues within 4Å: Chain L: E.59 Ligands: FE.136, FE.137, OXY.141, PER.142 Ligand excluded by PLIP PER.154: 6 residues within 4Å: Chain M: E.52, E.56 Ligands: FE.148, FE.150, OXY.153, PER.155 Ligand excluded by PLIP PER.155: 5 residues within 4Å: Chain M: E.59 Ligands: FE.148, FE.149, OXY.153, PER.154 Ligand excluded by PLIP PER.166: 6 residues within 4Å: Chain N: E.52, E.56 Ligands: FE.160, FE.162, OXY.165, PER.167 Ligand excluded by PLIP PER.167: 5 residues within 4Å: Chain N: E.59 Ligands: FE.160, FE.161, OXY.165, PER.166 Ligand excluded by PLIP PER.178: 6 residues within 4Å: Chain O: E.52, E.56 Ligands: FE.172, FE.174, OXY.177, PER.179 Ligand excluded by PLIP PER.179: 5 residues within 4Å: Chain O: E.59 Ligands: FE.172, FE.173, OXY.177, PER.178 Ligand excluded by PLIP PER.190: 6 residues within 4Å: Chain P: E.52, E.56 Ligands: FE.184, FE.186, OXY.189, PER.191 Ligand excluded by PLIP PER.191: 5 residues within 4Å: Chain P: E.59 Ligands: FE.184, FE.185, OXY.189, PER.190 Ligand excluded by PLIP PER.202: 6 residues within 4Å: Chain Q: E.52, E.56 Ligands: FE.196, FE.198, OXY.201, PER.203 Ligand excluded by PLIP PER.203: 5 residues within 4Å: Chain Q: E.59 Ligands: FE.196, FE.197, OXY.201, PER.202 Ligand excluded by PLIP PER.214: 6 residues within 4Å: Chain R: E.52, E.56 Ligands: FE.208, FE.210, OXY.213, PER.215 Ligand excluded by PLIP PER.215: 5 residues within 4Å: Chain R: E.59 Ligands: FE.208, FE.209, OXY.213, PER.214 Ligand excluded by PLIP PER.226: 6 residues within 4Å: Chain S: E.52, E.56 Ligands: FE.220, FE.222, OXY.225, PER.227 Ligand excluded by PLIP PER.227: 5 residues within 4Å: Chain S: E.59 Ligands: FE.220, FE.221, OXY.225, PER.226 Ligand excluded by PLIP PER.238: 6 residues within 4Å: Chain T: E.52, E.56 Ligands: FE.232, FE.234, OXY.237, PER.239 Ligand excluded by PLIP PER.239: 5 residues within 4Å: Chain T: E.59 Ligands: FE.232, FE.233, OXY.237, PER.238 Ligand excluded by PLIP PER.250: 6 residues within 4Å: Chain U: E.52, E.56 Ligands: FE.244, FE.246, OXY.249, PER.251 Ligand excluded by PLIP PER.251: 5 residues within 4Å: Chain U: E.59 Ligands: FE.244, FE.245, OXY.249, PER.250 Ligand excluded by PLIP PER.262: 6 residues within 4Å: Chain V: E.52, E.56 Ligands: FE.256, FE.258, OXY.261, PER.263 Ligand excluded by PLIP PER.263: 5 residues within 4Å: Chain V: E.59 Ligands: FE.256, FE.257, OXY.261, PER.262 Ligand excluded by PLIP PER.274: 6 residues within 4Å: Chain W: E.52, E.56 Ligands: FE.268, FE.270, OXY.273, PER.275 Ligand excluded by PLIP PER.275: 5 residues within 4Å: Chain W: E.59 Ligands: FE.268, FE.269, OXY.273, PER.274 Ligand excluded by PLIP PER.286: 6 residues within 4Å: Chain X: E.52, E.56 Ligands: FE.280, FE.282, OXY.285, PER.287 Ligand excluded by PLIP PER.287: 5 residues within 4Å: Chain X: E.59 Ligands: FE.280, FE.281, OXY.285, PER.286 Ligand excluded by PLIP

24 x GOL: GLYCEROL(Non-functional Binders)

GOL.12: 4 residues within 4Å: Chain A: L.80 Chain V: S.26, L.80 Ligands: GOL.264 Ligand excluded by PLIP GOL.24: 4 residues within 4Å: Chain B: L.80 Chain W: S.26, L.80 Ligands: GOL.276 Ligand excluded by PLIP GOL.36: 4 residues within 4Å: Chain C: L.80 Chain X: S.26, L.80 Ligands: GOL.288 Ligand excluded by PLIP GOL.48: 4 residues within 4Å: Chain D: L.80 Chain U: S.26, L.80 Ligands: GOL.252 Ligand excluded by PLIP GOL.60: 4 residues within 4Å: Chain E: L.80 Chain Q: S.26, L.80 Ligands: GOL.204 Ligand excluded by PLIP GOL.72: 4 residues within 4Å: Chain F: L.80 Chain T: S.26, L.80 Ligands: GOL.240 Ligand excluded by PLIP GOL.84: 4 residues within 4Å: Chain G: L.80 Chain S: S.26, L.80 Ligands: GOL.228 Ligand excluded by PLIP GOL.96: 4 residues within 4Å: Chain H: L.80 Chain R: S.26, L.80 Ligands: GOL.216 Ligand excluded by PLIP GOL.108: 4 residues within 4Å: Chain I: L.80 Chain P: S.26, L.80 Ligands: GOL.192 Ligand excluded by PLIP GOL.120: 4 residues within 4Å: Chain J: L.80 Chain M: S.26, L.80 Ligands: GOL.156 Ligand excluded by PLIP GOL.132: 4 residues within 4Å: Chain K: L.80 Chain N: S.26, L.80 Ligands: GOL.168 Ligand excluded by PLIP GOL.144: 4 residues within 4Å: Chain L: L.80 Chain O: S.26, L.80 Ligands: GOL.180 Ligand excluded by PLIP GOL.156: 4 residues within 4Å: Chain J: S.26, L.80 Chain M: L.80 Ligands: GOL.120 Ligand excluded by PLIP GOL.168: 4 residues within 4Å: Chain K: S.26, L.80 Chain N: L.80 Ligands: GOL.132 Ligand excluded by PLIP GOL.180: 4 residues within 4Å: Chain L: S.26, L.80 Chain O: L.80 Ligands: GOL.144 Ligand excluded by PLIP GOL.192: 4 residues within 4Å: Chain I: S.26, L.80 Chain P: L.80 Ligands: GOL.108 Ligand excluded by PLIP GOL.204: 4 residues within 4Å: Chain E: S.26, L.80 Chain Q: L.80 Ligands: GOL.60 Ligand excluded by PLIP GOL.216: 4 residues within 4Å: Chain H: S.26, L.80 Chain R: L.80 Ligands: GOL.96 Ligand excluded by PLIP GOL.228: 4 residues within 4Å: Chain G: S.26, L.80 Chain S: L.80 Ligands: GOL.84 Ligand excluded by PLIP GOL.240: 4 residues within 4Å: Chain F: S.26, L.80 Chain T: L.80 Ligands: GOL.72 Ligand excluded by PLIP GOL.252: 4 residues within 4Å: Chain D: S.26, L.80 Chain U: L.80 Ligands: GOL.48 Ligand excluded by PLIP GOL.264: 4 residues within 4Å: Chain A: S.26, L.80 Chain V: L.80 Ligands: GOL.12 Ligand excluded by PLIP GOL.276: 4 residues within 4Å: Chain B: S.26, L.80 Chain W: L.80 Ligands: GOL.24 Ligand excluded by PLIP GOL.288: 4 residues within 4Å: Chain C: S.26, L.80 Chain X: L.80 Ligands: GOL.36 Ligand excluded by PLIP

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Pozzi, C. et al., Chemistry at the protein-mineral interface in L-ferritin assists the assembly of a functional ( mu (3)-oxo)Tris[( mu (2)-peroxo)] triiron(III) cluster. Proc. Natl. Acad. Sci. U.S.A. (2017)

Release Date

2017-02-22

Peptides

Ferritin light chain: ABCDEFGHIJKLMNOPQRSTUVWX

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
A

C
A

D
A

E
A

F
A

G
A

H
A

I
A

J
A

K
A

L
A

M
A

N
A

O
A

P
A

Q
A

R
A

S
A

T
A

U
A

V
A

W
A

X
A

Ferritin light chain

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