SMTL ID : 5lgx.1

Structure of Oxidised Pentaerythritol Tetranitrate Reductase

Coordinates

PDB Format

Method

X-RAY DIFFRACTION 1.50 Å

Oligo State

monomer

Ligands

1 x FMN: FLAVIN MONONUCLEOTIDE(Non-covalent)

FMN.1: 19 residues within 4Å: Chain A: A.22, P.23, L.24, T.25, A.57, Q.99, H.180, H.183, R.232, L.274, G.300, A.301, F.321, G.322, R.323, F.349, Y.350 Ligands: IPA.2, IPA.5 23 PLIP interactions: 23 interactions with chain A Hydrophobic interactions: A:L.24, A:L.274, A:R.323, A:F.349, A:Y.350 Hydrogen bonds: A:P.23, A:T.25, A:T.25, A:A.57, A:Q.99, A:Q.99, A:H.183, A:R.232, A:R.232, A:G.300, A:A.301, A:G.322, A:R.323 Water bridges: A:Y.302, A:Y.302, A:R.323, A:D.324 Salt bridges: A:R.323

4 x IPA: ISOPROPYL ALCOHOL(Non-functional Binders)

IPA.2: 6 residues within 4Å: Chain A: H.183, S.270, T.272, D.273, L.274 Ligands: FMN.1 2 PLIP interactions: 2 interactions with chain A Hydrogen bonds: A:D.273, A:L.274 IPA.3: 4 residues within 4Å: Chain A: Y.254, E.257, E.258, K.261 5 PLIP interactions: 5 interactions with chain A Hydrophobic interactions: A:Y.254, A:Y.254, A:E.257, A:E.258 Hydrogen bonds: A:E.257 IPA.4: 0 residues within 4Å: (No contacts) No protein-ligand interaction detected (PLIP) IPA.5: 6 residues within 4Å: Chain A: T.25, Y.67, W.101, Y.185, Y.350 Ligands: FMN.1 5 PLIP interactions: 5 interactions with chain A Hydrophobic interactions: A:T.25, A:W.101 Hydrogen bonds: A:Y.185, A:Y.350, A:Y.350

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Kwon, H. et al., Combining X-ray and neutron crystallography with spectroscopy. Acta Crystallogr D Struct Biol (2017)

Release Date

2017-02-15

Peptides

Pentaerythritol tetranitrate reductase: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

Pentaerythritol tetranitrate reductase

Related Entries With Identical Sequence