SMTL ID : 5lgz.1

Structure of Photoreduced Pentaerythritol Tetranitrate Reductase

Coordinates

PDB Format

Method

X-RAY DIFFRACTION 1.50 Å

Oligo State

monomer

Ligands

2 x IPA: ISOPROPYL ALCOHOL(Non-functional Binders)

IPA.1: 6 residues within 4Å: Chain A: T.25, Y.67, W.101, Y.185, Y.350 Ligands: FNR.3 3 PLIP interactions: 3 interactions with chain A Hydrophobic interactions: A:T.25 Hydrogen bonds: A:Y.350 Water bridges: A:Y.185 IPA.2: 5 residues within 4Å: Chain A: H.183, T.272, D.273, L.274 Ligands: FNR.3 1 PLIP interactions: 1 interactions with chain A Hydrophobic interactions: A:L.274

1 x FNR: 1-DEOXY-1-(7,8-DIMETHYL-2,4-DIOXO-3,4-DIHYDRO-2H-BENZO[G]PTERIDIN-1-ID-10(5H)-YL)-5-O-PHOSPHONATO-D-RIBITOL(Non-covalent)

FNR.3: 19 residues within 4Å: Chain A: A.22, P.23, L.24, T.25, A.57, Q.99, H.180, H.183, R.232, L.274, G.300, A.301, F.321, G.322, R.323, F.349, Y.350 Ligands: IPA.1, IPA.2 22 PLIP interactions: 22 interactions with chain A Hydrophobic interactions: A:L.24, A:R.323, A:F.349 Hydrogen bonds: A:P.23, A:T.25, A:T.25, A:T.25, A:A.57, A:Q.99, A:Q.99, A:H.183, A:R.232, A:R.232, A:G.300, A:A.301, A:G.322, A:R.323 Water bridges: A:Y.302, A:Y.302, A:R.323, A:D.324 Salt bridges: A:R.323

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Kwon, H. et al., Combining X-ray and neutron crystallography with spectroscopy. Acta Crystallogr D Struct Biol (2017)

Release Date

2017-02-15

Peptides

Pentaerythritol tetranitrate reductase: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

Pentaerythritol tetranitrate reductase

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