SMTL ID : 5lqd.1 (1 other biounit)

Trehalose-6-phosphate synthase, GDP-glucose-dependent OtsA

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 1.95 Å

Oligo State

homo-dimer

Ligands

2 x MES: 2-(N-MORPHOLINO)-ETHANESULFONIC ACID(Non-covalent)

MES.1: 6 residues within 4Å: Chain A: N.100, W.104, R.276, E.278, K.281, S.313 7 PLIP interactions: 7 interactions with chain A Hydrogen bonds: A:S.313, A:R.314 Water bridges: A:N.100, A:R.276, A:K.281, A:K.281 Salt bridges: A:K.281 MES.3: 6 residues within 4Å: Chain B: N.100, W.104, R.276, E.278, K.281, S.313 5 PLIP interactions: 5 interactions with chain B Water bridges: B:N.100, B:K.281, B:K.281 Salt bridges: B:E.278, B:K.281

2 x EDO: 1,2-ETHANEDIOL(Non-functional Binders)

EDO.2: 7 residues within 4Å: Chain A: V.102, Y.111, P.117, V.118, F.119, F.123, R.126 4 PLIP interactions: 4 interactions with chain A Hydrogen bonds: A:V.118, A:R.126 Water bridges: A:D.120, A:F.123 EDO.4: 6 residues within 4Å: Chain B: V.102, Y.111, P.117, V.118, F.119, F.123 1 PLIP interactions: 1 interactions with chain B Hydrogen bonds: B:V.118

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Asencion Diez, M.D. et al., The Production and Utilization of GDP-glucose in the Biosynthesis of Trehalose 6-Phosphate by Streptomyces venezuelae. J. Biol. Chem. (2017)

Release Date

2016-12-07

Peptides

Alpha,alpha-trehalose-phosphate synthase: AB

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
C

Alpha,alpha-trehalose-phosphate synthase

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