SMTL ID : 5ls4.1

Mopeia virus exonuclease domain complexed with Calcium

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 1.47 Å

Oligo State

monomer

Ligands

1 x CA: CALCIUM ION(Non-covalent)

CA.1: 7 residues within 4Å: Chain A: D.26, I.27, E.28, R.129, H.165, A.167, D.170 5 PLIP interactions: 2 interactions with chain A, 3 Ligand-Water interactions Metal complexes: A:D.26, A:D.170, H2O.2, H2O.3, H2O.7

1 x ZN: ZINC ION(Non-covalent)

ZN.2: 9 residues within 4Å: Chain A: E.36, H.49, Y.51, C.143, M.145, H.146, C.166, A.167, L.168 4 PLIP interactions: 4 interactions with chain A Metal complexes: A:E.36, A:C.143, A:H.146, A:C.166

1 x PEG: DI(HYDROXYETHYL)ETHER(Non-functional Binders)

PEG.3: 4 residues within 4Å: Chain A: R.105, I.116, K.117, L.118 1 PLIP interactions: 1 interactions with chain A Hydrogen bonds: A:L.118

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Yekwa, E. et al., Activity inhibition and crystal polymorphism induced by active-site metal swapping. Acta Crystallogr D Struct Biol (2017)

Release Date

2017-07-05

Peptides

Nucleoprotein: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

Nucleoprotein

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