SMTL ID : 5lso.1 (1 other biounit)

Crystal structure of SPF45 UHM domain with cyclic peptide inhibitor

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 2.22 Å

Oligo State

monomer

Ligands

1 x LYS- SER- ARG- TRP- ASP- GLU: LYS-SER-ARG-TRP-ASP-GLU(Non-covalent)

LYS-SER-ARG-TRP-ASP-GLU.1: 12 residues within 4Å: Chain A: M.15, V.16, D.22, L.25, E.28, E.32, L.75, R.78, Y.79, F.80, G.81, G.82 15 PLIP interactions: 15 interactions with chain A Hydrophobic interactions: A:E.32, A:L.75, A:F.80 Hydrogen bonds: A:E.28, A:Y.79, A:Y.79, A:G.81, A:G.82 Water bridges: A:E.20, A:D.22 Salt bridges: A:D.22, A:E.28, A:R.78 pi-Stacking: A:F.80, A:F.80

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Jagtap, P.K. et al., Rational Design of Cyclic Peptide Inhibitors of U2AF Homology Motif (UHM) Domains To Modulate Pre-mRNA Splicing. J. Med. Chem. (2016)

Release Date

2016-10-26

Peptides

Splicing factor 45: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

Splicing factor 45

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