SMTL ID : 5lsu.1 (1 other biounit)

Structure of the Epigenetic Oncogene MMSET and inhibition by N-Alkyl Sinefungin Derivatives

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 2.14 Å

Oligo State

monomer

Ligands

3 x ZN: ZINC ION(Non-covalent)

ZN.1: 4 residues within 4Å: Chain A: C.193, C.240, C.242, C.247 4 PLIP interactions: 4 interactions with chain A Metal complexes: A:C.193, A:C.240, A:C.242, A:C.247 ZN.2: 5 residues within 4Å: Chain A: C.65, C.67, C.75, C.81 Ligands: ZN.3 4 PLIP interactions: 4 interactions with chain A Metal complexes: A:C.65, A:C.67, A:C.75, A:C.81 ZN.3: 6 residues within 4Å: Chain A: C.65, C.75, C.90, C.95, C.101 Ligands: ZN.2 4 PLIP interactions: 4 interactions with chain A Metal complexes: A:C.75, A:C.90, A:C.95, A:C.101

1 x SAM: S-ADENOSYLMETHIONINE(Non-covalent)

SAM.4: 20 residues within 4Å: Chain A: R.122, G.123, W.124, T.164, H.165, F.166, Y.167, R.187, F.188, M.189, N.190, H.191, Y.228, N.235, T.238, V.239, C.240, R.241, C.242, L.251 11 PLIP interactions: 11 interactions with chain A Hydrogen bonds: A:W.124, A:W.124, A:W.124, A:H.165, A:F.166, A:N.190, A:H.191, A:H.191, A:N.235, A:R.241 Water bridges: A:R.122

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Tisi, D. et al., Structure of the Epigenetic Oncogene MMSET and Inhibition by N-Alkyl Sinefungin Derivatives. ACS Chem. Biol. (2016)

Release Date

2016-10-05

Peptides

Histone-lysine N-methyltransferase NSD2: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

Histone-lysine N-methyltransferase NSD2

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