SMTL ID : 5lt0.1

nucleotide-free kinesin-1 motor domain, P212121 crystal form

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 2.00 Å

Oligo State

monomer

Ligands

1 x SO4: SULFATE ION(Non-functional Binders)

SO4.1: 7 residues within 4Å: Chain A: Q.86, T.87, S.88, S.89, G.90, K.91, T.92 8 PLIP interactions: 8 interactions with chain A Hydrogen bonds: A:S.88, A:S.89, A:G.90, A:K.91, A:T.92 Water bridges: A:K.91, A:H.93 Salt bridges: A:K.91

1 x SR: STRONTIUM ION(Non-functional Binders)

SR.2: 4 residues within 4Å: Chain A: D.140, H.205, N.255, S.257 No protein-ligand interaction detected (PLIP)

3 x ACT: ACETATE ION(Non-functional Binders)

ACT.3: 6 residues within 4Å: Chain A: S.133, Y.164, V.165, E.170, L.209, Y.228 5 PLIP interactions: 5 interactions with chain A Hydrophobic interactions: A:L.209 Hydrogen bonds: A:S.133, A:S.133, A:V.165, A:E.170 ACT.4: 1 residues within 4Å: Chain A: Y.120 No protein-ligand interaction detected (PLIP) ACT.5: 4 residues within 4Å: Chain A: Y.138, T.195, N.196, H.200 5 PLIP interactions: 5 interactions with chain A Hydrophobic interactions: A:H.200 Water bridges: A:Y.138, A:Y.138, A:T.195 Salt bridges: A:H.200

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Cao, L. et al., The structural switch of nucleotide-free kinesin. Sci Rep (2017)

Release Date

2017-03-01

Peptides

Kinesin-like protein: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

Kinesin-like protein

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