SMTL ID : 5lt8.1

Structure of the Epigenetic Oncogene MMSET and inhibition by N-Alkyl Sinefungin Derivatives

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 1.57 Å

Oligo State

monomer

Ligands

3 x ZN: ZINC ION(Non-covalent)

ZN.1: 4 residues within 4Å: Chain A: C.215, C.262, C.264, C.269 4 PLIP interactions: 4 interactions with chain A Metal complexes: A:C.215, A:C.262, A:C.264, A:C.269 ZN.2: 5 residues within 4Å: Chain A: C.83, C.85, C.100, C.104 Ligands: ZN.3 4 PLIP interactions: 4 interactions with chain A Metal complexes: A:C.83, A:C.85, A:C.100, A:C.104 ZN.3: 5 residues within 4Å: Chain A: C.100, C.113, C.117, C.123 Ligands: ZN.2 4 PLIP interactions: 4 interactions with chain A Metal complexes: A:C.100, A:C.113, A:C.117, A:C.123

1 x SFG: SINEFUNGIN(Non-covalent)

SFG.4: 19 residues within 4Å: Chain A: K.144, G.145, W.146, I.186, H.187, Y.188, Y.189, R.209, F.210, M.211, N.212, H.213, Y.250, Q.260, K.261, C.262, F.263, C.264, L.273 17 PLIP interactions: 17 interactions with chain A Hydrophobic interactions: A:Y.250 Hydrogen bonds: A:K.144, A:W.146, A:I.186, A:H.187, A:Y.188, A:Y.188, A:R.209, A:N.212, A:N.212, A:H.213, A:H.213, A:Y.250, A:Q.260, A:F.263 Water bridges: A:M.211 Salt bridges: A:H.187

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Tisi, D. et al., Structure of the Epigenetic Oncogene MMSET and Inhibition by N-Alkyl Sinefungin Derivatives. ACS Chem. Biol. (2016)

Release Date

2016-10-05

Peptides

Histone-lysine N-methyltransferase SETD2: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

Histone-lysine N-methyltransferase SETD2

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