SMTL ID : 5lx3.1

CRYSTAL STRUCTURE OF VISFATIN IN COMPLEX WITH SAR154782.

Coordinates

PDB Format

Method

X-RAY DIFFRACTION 2.10 Å

Oligo State

homo-dimer

Ligands

2 x 7A1: 6-[4-[(6-azanylpyridin-3-yl)methylcarbamoylamino]-3-fluoranyl-phenyl]-2-(ethylamino)-~{N}-(2-piperidin-1-ylethyl)pyridine-3-carboxamide(Non-covalent)

7A1.1: 18 residues within 4Å: Chain A: Y.190, H.193, F.195, R.198, D.221, S.243, V.244, A.246, S.277, T.306, I.311, R.313, R.351, I.353, I.380, A.381 Chain B: D.18, Y.20 19 PLIP interactions: 17 interactions with chain A, 2 interactions with chain B Hydrophobic interactions: A:Y.190, A:D.221, A:V.244, A:I.311, A:R.351, A:I.353, A:A.381 Hydrogen bonds: A:R.198, A:S.277, B:D.18 Water bridges: A:Y.190, A:K.191, A:Y.197, A:D.221, A:D.221 pi-Stacking: A:F.195, B:Y.20 Halogen bonds: A:D.221, A:S.243 7A1.2: 18 residues within 4Å: Chain A: D.18, Y.20 Chain B: Y.190, H.193, F.195, R.198, D.221, S.243, V.244, A.246, S.277, T.306, I.311, R.313, R.351, I.353, I.380, A.381 20 PLIP interactions: 17 interactions with chain B, 3 interactions with chain A Hydrophobic interactions: B:Y.190, B:D.221, B:V.244, B:I.311, B:R.351, B:I.353, B:A.381 Hydrogen bonds: B:R.198, B:S.277, A:D.18 Water bridges: B:K.191, B:K.191, B:D.221, B:D.221, B:R.313, A:D.18 pi-Stacking: B:F.195, A:Y.20 Halogen bonds: B:D.221, B:S.243

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Bertrand, T. et al., CRYSTAL STRUCTURE OF VISFATIN IN COMPLEX WITH SAR154782. To Be Published

Release Date

2017-10-25

Peptides

Nicotinamide phosphoribosyltransferase: AB

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
B

Nicotinamide phosphoribosyltransferase

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