SMTL ID : 5lxe.1

F420-dependent glucose-6-phosphate dehydrogenase from Rhodococcus jostii RHA1

Coordinates

PDB Format

Method

X-RAY DIFFRACTION 1.47 Å

Oligo State

homo-dimer

Ligands

2 x GOL: GLYCEROL(Non-functional Binders)

GOL.1: 3 residues within 4Å: Chain A: R.318, E.321, R.325 3 PLIP interactions: 3 interactions with chain A Hydrogen bonds: A:R.318, A:R.325 Water bridges: A:R.325 GOL.4: 8 residues within 4Å: Chain B: K.8, A.9, S.10, A.11, E.12, S.37, H.39, H.310 5 PLIP interactions: 5 interactions with chain B Hydrogen bonds: B:K.8, B:K.8, B:E.12, B:S.37 Water bridges: B:A.11

2 x SO4: SULFATE ION(Non-functional Binders)

SO4.2: 4 residues within 4Å: Chain B: T.236, R.318, L.322, R.325 7 PLIP interactions: 7 interactions with chain B Hydrogen bonds: B:T.236 Water bridges: B:T.236, B:R.318, B:R.325, B:R.325 Salt bridges: B:R.318, B:R.325 SO4.3: 1 residues within 4Å: Chain B: Q.324 2 PLIP interactions: 2 interactions with chain B Hydrogen bonds: B:Q.324 Water bridges: B:Q.324

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Nguyen, Q.-T. et al., Discovery and characterization of an F420-dependent glucose-6-phosphate dehydrogenase (Rh-FGD1) from Rhodococcus jostii RHA1. Appl. Microbiol. Biotechnol. (2017)

Release Date

2016-12-28

Peptides

F420-dependent glucose-6-phosphate dehydrogenase 1: AB

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
B

F420-dependent glucose-6-phosphate dehydrogenase 1