SMTL ID : 5lxr.1

Structure of the minimal RBM7 - ZCCHC8 Complex

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 2.00 Å

Oligo State

hetero-1-1-mer

Ligands

3 x SM: SAMARIUM (III) ION(Non-covalent)

SM.1: 2 residues within 4Å: Chain A: D.13, E.64 3 PLIP interactions: 3 interactions with chain A Metal complexes: A:D.13, A:E.64, A:E.64 SM.2: 2 residues within 4Å: Chain A: D.13, E.64 1 PLIP interactions: 1 interactions with chain A Metal complexes: A:D.13 SM.3: 1 residues within 4Å: Chain A: E.28 4 PLIP interactions: 2 interactions with chain A, 2 Ligand-Water interactions Metal complexes: A:E.28, A:E.28, H2O.1, H2O.2

4 x BR: BROMIDE ION(Non-covalent)

BR.4: 3 residues within 4Å: Chain A: F.17, F.58, R.89 Ligand excluded by PLIP BR.5: 3 residues within 4Å: Chain A: T.26, E.27, I.45 Ligand excluded by PLIP BR.6: 4 residues within 4Å: Chain A: P.46, K.54, F.56, F.58 Ligand excluded by PLIP BR.8: 3 residues within 4Å: Chain B: P.9, I.31, R.35 Ligand excluded by PLIP

1 x CL: CHLORIDE ION(Non-functional Binders)

CL.7: 3 residues within 4Å: Chain A: E.27, I.45, K.47 Ligand excluded by PLIP

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Falk, S. et al., Structure of the RBM7-ZCCHC8 core of the NEXT complex reveals connections to splicing factors. Nat Commun (2016)

Release Date

2016-12-14

Peptides

RNA-binding protein 7: A
Zinc finger CCHC domain-containing protein 8: B

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
B

RNA-binding protein 7

Zinc finger CCHC domain-containing protein 8

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