SMTL ID : 5lye.1

Re-refined structure of the bacteriophage T4 short tail fibre PDB entry 1H6W containing 71 additionally identified residues

Coordinates

PDB Format

Method

X-RAY DIFFRACTION 1.90 Å

Oligo State

homo-trimer

Ligands

6 x CL: CHLORIDE ION(Non-functional Binders)

CL.1: 1 residues within 4Å: Chain A: S.303 Ligand excluded by PLIP CL.2: 2 residues within 4Å: Chain A: R.276, F.277 Ligand excluded by PLIP CL.4: 1 residues within 4Å: Chain B: S.303 Ligand excluded by PLIP CL.5: 2 residues within 4Å: Chain B: R.276, F.277 Ligand excluded by PLIP CL.7: 1 residues within 4Å: Chain C: S.303 Ligand excluded by PLIP CL.8: 2 residues within 4Å: Chain C: R.276, F.277 Ligand excluded by PLIP

3 x SO4: SULFATE ION(Non-functional Binders)

SO4.3: 1 residues within 4Å: Chain A: S.304 2 PLIP interactions: 2 interactions with chain A Water bridges: A:S.304, A:S.304 SO4.6: 1 residues within 4Å: Chain B: S.304 2 PLIP interactions: 2 interactions with chain B Water bridges: B:S.304, B:S.304 SO4.9: 1 residues within 4Å: Chain C: S.304 2 PLIP interactions: 2 interactions with chain C Water bridges: C:S.304, C:S.304

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Taylor, N.M.I. et al., Contractile injection systems of bacteriophages and related systems. Mol. Microbiol. (2018)

Release Date

2018-01-17

Peptides

Gp12: ABC

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
A

C
A

Gp12