SMTL ID : 5m05.1

Chicken smooth muscle myosin motor domain co-crystallized with the specific CK-571 inhibitor, MgADP form

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 2.67 Å

Oligo State

monomer

Ligands

1 x 52E: 4-{[(2-chloro-3-fluorobenzyl)carbamoyl](methyl)amino}-3,4-dideoxy-5-O-(isoquinolin-3-ylcarbamoyl)-D-erythro-pentitol(Non-covalent)

52E.1: 21 residues within 4Å: Chain A: M.89, A.90, L.95, V.100, S.117, G.118, L.119, F.120, F.493, N.494, M.497, E.501, F.517, G.709, V.710, E.712, G.713, I.714, C.717, P.722, R.724 10 PLIP interactions: 10 interactions with chain A Hydrophobic interactions: A:F.120, A:F.493, A:M.497, A:F.517, A:E.712, A:E.712, A:I.714 Hydrogen bonds: A:L.119, A:P.722, A:R.724

1 x MG: MAGNESIUM ION(Non-covalent)

MG.2: 3 residues within 4Å: Chain A: T.184, S.246 Ligands: ADP.3 5 PLIP interactions: 2 interactions with chain A, 3 Ligand-Water interactions Metal complexes: A:T.184, A:S.246, H2O.1, H2O.1, H2O.2

1 x ADP: ADENOSINE-5'-DIPHOSPHATE(Non-covalent)

ADP.3: 18 residues within 4Å: Chain A: I.113, N.125, P.126, Y.127, K.128, Q.129, Y.133, E.178, S.179, G.180, A.181, G.182, K.183, T.184, E.185, N.242, N.244 Ligands: MG.2 19 PLIP interactions: 19 interactions with chain A Hydrogen bonds: A:N.125, A:Y.133, A:Y.133, A:G.180, A:A.181, A:G.182, A:K.183, A:T.184, A:E.185, A:N.242 Water bridges: A:E.185, A:E.185, A:E.185, A:N.186, A:N.244, A:S.246, A:S.246, A:S.246 Salt bridges: A:K.183

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Sirigu, S. et al., Highly selective inhibition of myosin motors provides the basis of potential therapeutic application. Proc. Natl. Acad. Sci. U.S.A. (2016)

Release Date

2016-11-16

Peptides

Myosin-11: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

Myosin-11