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SMTL ID : 5m0s.1

Structure-based evolution of a hybrid steroid series of Autotaxin inhibitors

Coordinates
PDB Format
Method
X-RAY DIFFRACTION 2.10 Å
Oligo State
monomer
Ligands
1 x NAG- NAG- BMA- MAN- MAN- MAN- MAN- MAN- MAN: alpha-D-mannopyranose-(1-2)-alpha-D-mannopyranose-(1-3)-[alpha-D-mannopyranose-(1-2)-alpha-D-mannopyranose-(1-6)]alpha-D-mannopyranose-(1-6)-[alpha-D-mannopyranose-(1-3)]beta-D-mannopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose
1 x CA: CALCIUM ION(Non-covalent)
2 x ZN: ZINC ION(Non-covalent)
13 x IOD: IODIDE ION(Non-functional Binders)
1 x 7CW: [3,5-bis(chloranyl)phenyl]methyl ~{N}-[2-[[(4~{R})-4-[(3~{R},5~{S},7~{S},8~{R},9~{S},10~{S},13~{R},14~{S},17~{R})-10,13-dimethyl-3,7-bis(oxidanyl)-2,3,4,5,6,7,8,9,11,12,14,15,16,17-tetradecahydro-1~{H}-cyclopenta[a]phenanthren-17-yl]pentanoyl]amino]ethyl]carbamate(Non-covalent)
1 x NA: SODIUM ION(Non-functional Binders)
11 x SCN: THIOCYANATE ION(Non-functional Binders)
5 x GOL: GLYCEROL(Non-functional Binders)
Links
RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP
Citation
Keune, W.J. et al., Rational Design of Autotaxin Inhibitors by Structural Evolution of Endogenous Modulators. J. Med. Chem. (2017)
Release Date
2017-08-16
Peptides
Ectonucleotide pyrophosphatase/phosphodiesterase family member 2: A
SMTL:PDB
SMTL Chain Id:
PDB Chain Id:
A
A

Ectonucleotide pyrophosphatase/phosphodiesterase family member 2

Related Entries With Identical Sequence

5dlt.1 | 5ijq.1 | 5ijs.1 | 5lqq.1 | 5m0d.1 | 5m0e.1 | 5m0m.1 | 7p4j.1 | 7p4o.1