SMTL ID : 5m0y.1

Crystal Structure of the CohScaA-XDocCipB type II complex from Clostridium thermocellum at 1.5Angstrom resolution

Coordinates

PDB Format

Method

X-RAY DIFFRACTION 1.50 Å

Oligo State

hetero-1-1-mer

Ligands

2 x CA: CALCIUM ION(Non-covalent)

CA.1: 5 residues within 4Å: Chain A: D.138, N.140, D.142, A.144, D.149 5 PLIP interactions: 4 interactions with chain A, 1 Ligand-Water interactions Metal complexes: A:D.138, A:D.142, A:A.144, A:D.149, H2O.1 CA.2: 4 residues within 4Å: Chain A: D.101, D.109, A.111, D.116 5 PLIP interactions: 4 interactions with chain A, 1 Ligand-Water interactions Metal complexes: A:D.101, A:D.109, A:A.111, A:D.116, H2O.1

1 x SO4: SULFATE ION(Non-functional Binders)

SO4.3: 4 residues within 4Å: Chain A: R.104, K.105, E.119, K.122 4 PLIP interactions: 4 interactions with chain A Hydrogen bonds: A:K.105, A:E.119 Water bridges: A:K.122 Salt bridges: A:K.122

1 x GOL: GLYCEROL(Non-functional Binders)

GOL.4: 3 residues within 4Å: Chain A: D.20, Y.21, P.23 2 PLIP interactions: 2 interactions with chain A Hydrogen bonds: A:D.20, A:Y.21

6 x EDO: 1,2-ETHANEDIOL(Non-functional Binders)

EDO.5: 2 residues within 4Å: Chain A: I.54, S.55 1 PLIP interactions: 1 interactions with chain A Hydrogen bonds: A:S.55 EDO.6: 1 residues within 4Å: Chain A: T.83 1 PLIP interactions: 1 interactions with chain A Hydrogen bonds: A:T.83 EDO.7: 2 residues within 4Å: Chain A: D.47, E.48 2 PLIP interactions: 2 interactions with chain A Hydrogen bonds: A:E.48 Water bridges: A:T.46 EDO.9: 4 residues within 4Å: Chain B: T.113, E.114, E.115, S.116 3 PLIP interactions: 3 interactions with chain B Hydrogen bonds: B:E.115, B:S.116, B:S.116 EDO.10: 4 residues within 4Å: Chain B: D.87, D.89, I.94, N.96 1 PLIP interactions: 1 interactions with chain B Hydrogen bonds: B:D.87 EDO.11: 1 residues within 4Å: Chain B: V.179 No protein-ligand interaction detected (PLIP)

1 x PGE: TRIETHYLENE GLYCOL(Non-functional Binders)

PGE.8: 7 residues within 4Å: Chain B: E.12, L.13, K.14, I.165, Q.166, P.167, D.168 2 PLIP interactions: 2 interactions with chain B Hydrogen bonds: B:L.13, B:D.168

1 x P6G: HEXAETHYLENE GLYCOL(Non-functional Binders)

P6G.12: 8 residues within 4Å: Chain B: I.27, T.29, P.57, E.58, G.71, T.73, I.118, K.121 1 PLIP interactions: 1 interactions with chain B Hydrogen bonds: B:K.121

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Bras, J.L. et al., Diverse specificity of cellulosome attachment to the bacterial cell surface. Sci Rep (2016)

Release Date

2017-09-06

Peptides

Ig domain protein group 2 domain protein: A
Cellulosome anchoring protein cohesin region: B

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
B

B
A

Ig domain protein group 2 domain protein

Cellulosome anchoring protein cohesin region

Related Entries With Identical Sequence