SMTL ID : 5m24.1

RARg mutant-S371E

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 1.69 Å

Oligo State

monomer

Ligands

1 x 9CR: (9cis)-retinoic acid(Non-covalent)

9CR.1: 15 residues within 4Å: Chain A: W.54, F.57, L.60, A.61, L.95, L.98, M.99, I.102, R.105, F.115, S.116, F.131, G.220, L.227, I.239 17 PLIP interactions: 17 interactions with chain A Hydrophobic interactions: A:W.54, A:F.57, A:F.57, A:A.61, A:L.95, A:L.98, A:L.98, A:I.102, A:I.102, A:F.115, A:F.131, A:F.131, A:L.227, A:I.239 Hydrogen bonds: A:S.116 Water bridges: A:R.105 Salt bridges: A:R.105

1 x LMU: DODECYL-ALPHA-D-MALTOSIDE(Non-covalent)

LMU.2: 9 residues within 4Å: Chain A: K.63, I.66, K.67, V.69, K.91, C.94, L.238, E.241, M.242 8 PLIP interactions: 8 interactions with chain A Hydrophobic interactions: A:V.69, A:K.91, A:L.238, A:E.241, A:M.242 Hydrogen bonds: A:K.63, A:K.63, A:K.67

1 x CL: CHLORIDE ION(Non-functional Binders)

CL.3: 1 residues within 4Å: Chain A: E.244 Ligand excluded by PLIP

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Chebaro, Y. et al., Allosteric Regulation in the Ligand Binding Domain of Retinoic Acid Receptor gamma. PLoS ONE (2017)

Release Date

2017-09-20

Peptides

Retinoic acid receptor gamma: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

Retinoic acid receptor gamma