SMTL ID : 5m31.1

Macrodomain of Thermus aquaticus DarG

Coordinates

PDB Format

Method

X-RAY DIFFRACTION 1.67 Å

Oligo State

monomer

Ligands

2 x GOL: GLYCEROL(Non-functional Binders)

GOL.1: 3 residues within 4Å: Chain A: V.36, G.38, W.93 1 PLIP interactions: 1 interactions with chain A Water bridges: A:G.38 GOL.2: 8 residues within 4Å: Chain A: G.17, N.18, L.19, P.124, P.125, Y.157, E.158 Ligands: CL.4 4 PLIP interactions: 4 interactions with chain A Hydrogen bonds: A:G.17, A:L.19, A:E.158 Water bridges: A:E.158

3 x CL: CHLORIDE ION(Non-functional Binders)

CL.3: 5 residues within 4Å: Chain A: N.32, V.36, G.38, K.39, W.93 Ligand excluded by PLIP CL.4: 2 residues within 4Å: Chain A: Q.44 Ligands: GOL.2 Ligand excluded by PLIP CL.5: 5 residues within 4Å: Chain A: F.49, D.51, N.52, Y.73, R.75 Ligand excluded by PLIP

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Jankevicius, G. et al., The Toxin-Antitoxin System DarTG Catalyzes Reversible ADP-Ribosylation of DNA. Mol. Cell (2016)

Release Date

2016-12-21

Peptides

Appr-1-p processing domain protein: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

Appr-1-p processing domain protein

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