SMTL ID : 5m35.1

The molecular tweezer CLR01 stabilizes a disordered protein-protein interface

Coordinates

PDB Format

Method

X-RAY DIFFRACTION 2.38 Å

Oligo State

hetero-2-1-mer

Ligands

1 x ARG- SER- PRO- SEP- MET- PRO- GLU: M-phase inducer phosphatase 3(Non-covalent)

ARG-SER-PRO-SEP-MET-PRO-GLU.1: 16 residues within 4Å: Chain B: V.45, K.48, R.55, R.59, K.119, R.126, Y.127, E.130, G.168, L.171, N.172, V.175, E.179, I.216, L.219, N.223 13 PLIP interactions: 13 interactions with chain B Hydrophobic interactions: B:V.45, B:L.219 Hydrogen bonds: B:R.59, B:R.59, B:E.130, B:N.172, B:N.223 Water bridges: B:R.55, B:R.55, B:R.59 Salt bridges: B:K.48, B:R.55, B:R.126

2 x GOL: GLYCEROL(Non-functional Binders)

GOL.2: 4 residues within 4Å: Chain A: Y.81 Chain B: K.8, D.20, C.24 2 PLIP interactions: 2 interactions with chain B Hydrogen bonds: B:K.8, B:K.8 GOL.4: 3 residues within 4Å: Chain A: K.8 Chain B: Y.81, K.84 2 PLIP interactions: 2 interactions with chain B Hydrogen bonds: B:Y.81, B:K.84

2 x BEZ: BENZOIC ACID(Non-covalent)

BEZ.3: 5 residues within 4Å: Chain A: F.195, T.214, M.217, Q.218, R.221 3 PLIP interactions: 3 interactions with chain A Hydrophobic interactions: A:F.195, A:Q.218 Salt bridges: A:R.221 BEZ.5: 4 residues within 4Å: Chain B: F.195, M.217, Q.218, R.221 4 PLIP interactions: 4 interactions with chain B Hydrophobic interactions: B:F.195, B:M.217, B:Q.218 Salt bridges: B:R.221

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Bier, D. et al., The Molecular Tweezer CLR01 Stabilizes a Disordered Protein-Protein Interface. J. Am. Chem. Soc. (2017)

Release Date

2017-11-15

Peptides

14-3-3 protein zeta/delta: AB
M-phase inducer phosphatase 3: C

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
B

C
C

14-3-3 protein zeta/delta

M-phase inducer phosphatase 3

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