SMTL ID : 5m3v.1

BEAT Fc

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 1.97 Å

Oligo State

hetero-1-1-mer

Ligands

2 x NAG- NAG- BMA- MAN- NAG- GAL- MAN- NAG- FUL: beta-D-galactopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-2)-alpha-D-mannopyranose-(1-6)-[2-acetamido-2-deoxy-beta-D-glucopyranose-(1-2)-alpha-D-mannopyranose-(1-3)]beta-D-mannopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-[beta-L-fucopyranose-(1-6)]2-acetamido-2-deoxy-beta-D-glucopyranose

NAG-NAG-BMA-MAN-NAG-GAL-MAN-NAG-FUL.1: 14 residues within 4Å: Chain A: F.21, F.23, P.24, P.25, K.26, E.38, T.40, V.44, D.45, Q.75, Y.76, N.77, T.79, R.81 1 PLIP interactions: 1 interactions with chain A Hydrogen bonds: A:Q.75, A:Y.76, A:F.23, A:D.29, A:D.29, A:E.38, A:E.38, A:T.40, A:T.40 Water bridges: A:N.77, A:K.26, A:K.114 NAG-NAG-BMA-MAN-NAG-GAL-MAN-NAG-FUL.2: 10 residues within 4Å: Chain B: F.21, F.23, P.24, P.25, K.26, D.29, E.38, T.40, V.42, K.114 5 PLIP interactions: 5 interactions with chain B Hydrogen bonds: B:K.26, B:D.29, B:D.29, B:E.38, B:E.38

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Skegro, D. et al., Immunoglobulin domain interface exchange as a platform technology for the generation of Fc heterodimers and bispecific antibodies. J. Biol. Chem. (2017)

Release Date

2017-05-10

Peptides

Ig gamma-1 chain C region,Ig gamma-3 chain C region: A
Ig gamma-1 chain C region: B

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
B

Ig gamma-1 chain C region,Ig gamma-3 chain C region

Ig gamma-1 chain C region