SMTL ID : 5m5q.1

COPS5(2-257) IN COMPLEX WITH A AZAINDOLE (COMPOUND 4)

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 2.20 Å

Oligo State

monomer

Ligands

1 x ZN: ZINC ION(Non-covalent)

ZN.1: 5 residues within 4Å: Chain A: H.138, H.140, S.148, D.151 Ligands: 7K1.2 4 PLIP interactions: 4 interactions with chain A Metal complexes: A:H.138, A:H.140, A:D.151, A:D.151

1 x 7K1: 1-[(3~{R})-3-(1~{H}-benzimidazol-2-yl)morpholin-4-yl]-3-[2-(4-methyl-2-phenyl-phenyl)-1~{H}-pyrrolo[2,3-b]pyridin-3-yl]propan-1-one(Non-covalent)

7K1.2: 13 residues within 4Å: Chain A: E.76, V.77, M.78, P.99, W.136, H.138, H.140, Y.143, S.148, I.150, D.151, T.154 Ligands: ZN.1 10 PLIP interactions: 10 interactions with chain A Hydrophobic interactions: A:E.76, A:E.76, A:M.78, A:P.99, A:W.136, A:W.136, A:H.138, A:I.150 Hydrogen bonds: A:S.148, A:D.151

1 x MPD: (4S)-2-METHYL-2,4-PENTANEDIOL(Non-functional Binders)

MPD.3: 3 residues within 4Å: Chain A: W.136, N.158, F.165 4 PLIP interactions: 4 interactions with chain A Hydrophobic interactions: A:W.136, A:F.165 Hydrogen bonds: A:N.158 Water bridges: A:Q.162

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Altmann, E. et al., Azaindoles as Zinc-Binding Small-Molecule Inhibitors of the JAMM Protease CSN5. Angew. Chem. Int. Ed. Engl. (2017)

Release Date

2017-01-11

Peptides

COP9 signalosome complex subunit 5: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

COP9 signalosome complex subunit 5

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