SMTL ID : 5m6a.1 (1 other biounit)

Crystal structure of cardiotoxic Bence-Jones light chain dimer H9

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 1.64 Å

Oligo State

homo-dimer

Ligands

2 x GOL: GLYCEROL(Non-functional Binders)

GOL.1: 5 residues within 4Å: Chain A: N.98, L.99 Chain B: L.48, Y.51, P.57 1 PLIP interactions: 1 interactions with chain A Hydrogen bonds: A:L.99 GOL.3: 1 residues within 4Å: Chain B: R.193 2 PLIP interactions: 2 interactions with chain B Hydrogen bonds: B:R.193, B:R.193

2 x PO4: PHOSPHATE ION(Non-functional Binders)

PO4.2: 3 residues within 4Å: Chain A: T.108, Y.144, Y.176 3 PLIP interactions: 3 interactions with chain A Hydrogen bonds: A:Y.176, A:Y.176 Water bridges: A:Y.176 PO4.4: 7 residues within 4Å: Chain A: Y.38, P.46, Y.89, F.101 Chain B: Y.38, P.46, F.101 1 PLIP interactions: 1 interactions with chain B Water bridges: B:P.46

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Oberti, L. et al., Concurrent structural and biophysical traits link with immunoglobulin light chains amyloid propensity. Sci Rep (2017)

Release Date

2017-11-15

Peptides

Bence-Jones light chain: AB

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
B

Bence-Jones light chain

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