SMTL ID : 5m70.2 (1 other biounit)

Crystal Structure of human RhoGAP mutated in its arginin finger (R85A) in complex with RhoA.GDP.AlF4- human

Coordinates

PDB Format

Method

X-RAY DIFFRACTION 2.20 Å

Oligo State

hetero-1-1-mer

Ligands

1 x MG: MAGNESIUM ION(Non-covalent)

MG.1: 4 residues within 4Å: Chain B: T.18, T.36 Ligands: GDP.2, ALF.3 4 PLIP interactions: 2 interactions with chain B, 2 Ligand-Water interactions Metal complexes: B:T.18, B:T.36, H2O.2, H2O.2

1 x GDP: GUANOSINE-5'-DIPHOSPHATE(Non-covalent)

GDP.2: 16 residues within 4Å: Chain B: A.14, C.15, G.16, K.17, T.18, C.19, F.29, Y.33, K.117, D.119, L.120, S.159, A.160, K.161 Ligands: MG.1, ALF.3 17 PLIP interactions: 17 interactions with chain B Hydrogen bonds: B:A.14, B:C.15, B:G.16, B:K.17, B:T.18, B:C.19, B:K.117, B:K.117, B:A.160, B:K.161 Water bridges: B:T.18, B:T.36, B:T.36, B:G.61 Salt bridges: B:K.17, B:D.119 pi-Stacking: B:F.29

1 x ALF: TETRAFLUOROALUMINATE ION(Non-covalent)

ALF.3: 13 residues within 4Å: Chain B: D.12, G.13, A.14, K.17, Y.33, P.35, T.36, T.59, A.60, G.61, Q.62 Ligands: MG.1, GDP.2 No protein-ligand interaction detected (PLIP)

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Jin, Y. et al., Assessing the Influence of Mutation on GTPase Transition States by Using X-ray Crystallography, (19) F NMR, and DFT Approaches. Angew. Chem. Int. Ed. Engl. (2017)

Release Date

2017-05-17

Peptides

Rho GTPase-activating protein 1: A
Transforming protein RhoA: B

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
F

B
G

Rho GTPase-activating protein 1

Transforming protein RhoA

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