SMTL ID : 5m78.1

Human Carbonic Anhydrase II in complex with fragment-like inhibitor.

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 1.08 Å

Oligo State

monomer

Ligands

1 x DMS: DIMETHYL SULFOXIDE(Non-functional Binders)

DMS.1: 6 residues within 4Å: Chain A: Y.12, P.18, D.247, W.249, R.250, P.251 3 PLIP interactions: 3 interactions with chain A Salt bridges: A:D.247 pi-Cation interactions: A:W.249, A:W.249

1 x ZN: ZINC ION(Non-covalent)

ZN.2: 6 residues within 4Å: Chain A: H.99, H.101, E.111, H.124, T.203 Ligands: SAL.4 4 PLIP interactions: 3 interactions with chain A, 1 Ligand-Water interactions Metal complexes: A:H.99, A:H.101, A:H.124, H2O.1

1 x MBO: MERCURIBENZOIC ACID(Non-covalent)

MBO.3: 5 residues within 4Å: Chain A: Q.140, Q.141, P.142, E.209, C.210 3 PLIP interactions: 3 interactions with chain A Hydrophobic interactions: A:P.142 Metal complexes: A:Q.141, A:C.210

1 x SAL: 2-HYDROXYBENZOIC ACID(Non-covalent)

SAL.4: 9 residues within 4Å: Chain A: Q.97, H.99, V.126, F.135, L.202, T.203, T.204, P.206 Ligands: ZN.2 8 PLIP interactions: 8 interactions with chain A Hydrophobic interactions: A:F.135, A:L.202, A:L.202 Hydrogen bonds: A:T.203, A:T.204, A:T.204, A:T.204 Salt bridges: A:H.99

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Glockner, S. et al., A Proof-of-Concept Fragment Screening of a Hit-Validated 96-Compounds Library against Human Carbonic Anhydrase II. Biomolecules (2020)

Release Date

2017-12-20

Peptides

Carbonic anhydrase 2: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

Carbonic anhydrase 2

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