SMTL ID : 5m9x.1

Structure of sucrose phosphorylase from Bifidobacterium adolescentis bound to glycosylated resveratrol

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 2.35 Å

Oligo State

monomer

Ligands

1 x 7KP: (2~{R},3~{S},4~{S},5~{R},6~{R})-2-(hydroxymethyl)-6-[3-[(~{E})-2-(4-hydroxyphenyl)ethenyl]-5-oxidanyl-phenoxy]oxane-3,4,5-triol(Non-covalent)

7KP.1: 22 residues within 4Å: Chain A: D.50, F.53, H.88, Y.132, P.134, R.135, F.156, Q.160, R.190, N.192, A.193, Y.196, E.232, H.234, H.289, D.290, I.295, Q.301, Y.344, F.345, R.399, R.403 19 PLIP interactions: 19 interactions with chain A Hydrophobic interactions: A:P.134, A:I.295, A:Y.344 Hydrogen bonds: A:D.50, A:F.53, A:Q.160, A:R.190, A:R.190, A:N.192, A:N.192, A:A.193, A:E.232, A:H.289, A:D.290, A:Q.301, A:R.399, A:R.399 Water bridges: A:R.403, A:R.403

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Kraus, M. et al., Switching enzyme specificity from phosphate to resveratrol glucosylation. Chem. Commun. (Camb.) (2017)

Release Date

2017-12-20

Peptides

Sucrose phosphorylase: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
B

Sucrose phosphorylase

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