SMTL ID : 5mag.1

Crystal structure of MELK in complex with an inhibitor

Coordinates

PDB Format

Method

X-RAY DIFFRACTION 2.35 Å

Oligo State

monomer

Ligands

1 x 7KC: ~{N}-[(1~{S})-2-(dimethylamino)-1-phenyl-ethyl]-6,6-dimethyl-3-[(2-methylthieno[3,2-d]pyrimidin-4-yl)amino]-1,4-dihydropyrrolo[3,4-c]pyrazole-5-carboxamide(Non-covalent)

7KC.1: 19 residues within 4Å: Chain A: I.18, G.19, T.20, G.21, A.24, V.26, A.39, K.41, C.71, L.87, E.88, Y.89, C.90, P.91, G.93, N.138, L.140, I.150, D.151 9 PLIP interactions: 9 interactions with chain A Hydrophobic interactions: A:I.18, A:V.26, A:A.39, A:L.87, A:I.150 Hydrogen bonds: A:C.90, A:C.90 Water bridges: A:K.41 Salt bridges: A:D.151

1 x DMS: DIMETHYL SULFOXIDE(Non-functional Binders)

DMS.2: 8 residues within 4Å: Chain A: E.36, M.37, Y.74, E.88, Y.89, E.143, A.323, R.327 3 PLIP interactions: 3 interactions with chain A Hydrogen bonds: A:Y.89 Salt bridges: A:E.36, A:E.143

1 x GOL: GLYCEROL(Non-functional Binders)

GOL.3: 6 residues within 4Å: Chain A: L.33, L.291, H.294, H.295, H.313, L.314 1 PLIP interactions: 1 interactions with chain A Hydrogen bonds: A:H.295

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Klaeger, S. et al., The target landscape of clinical kinase drugs. Science (2017)

Release Date

2017-12-06

Peptides

Maternal embryonic leucine zipper kinase: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

Maternal embryonic leucine zipper kinase

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