- Coordinates
- PDB Format
- Method
- X-RAY DIFFRACTION 2.05 Å
- Oligo State
- homo-dimer
- Ligands
- 2 x ZN: ZINC ION(Non-covalent)
- 8 x CL: CHLORIDE ION(Non-functional Binders)
CL.2: 5 residues within 4Å:- Chain A: R.22, G.24, G.25, E.26, L.93
Ligand excluded by PLIPCL.3: 3 residues within 4Å:- Chain A: K.41, I.69, Q.70
Ligand excluded by PLIPCL.4: 5 residues within 4Å:- Chain A: H.106, A.113, F.114, D.115, Y.128
Ligand excluded by PLIPCL.5: 3 residues within 4Å:- Chain A: E.26, S.27, R.82
Ligand excluded by PLIPCL.15: 5 residues within 4Å:- Chain C: R.22, G.24, G.25, E.26, L.93
Ligand excluded by PLIPCL.16: 3 residues within 4Å:- Chain C: K.41, I.69, Q.70
Ligand excluded by PLIPCL.17: 5 residues within 4Å:- Chain C: H.106, A.113, F.114, D.115, Y.128
Ligand excluded by PLIPCL.18: 3 residues within 4Å:- Chain C: E.26, S.27, R.82
Ligand excluded by PLIP- 4 x PEG: DI(HYDROXYETHYL)ETHER(Non-functional Binders)
PEG.6: 5 residues within 4Å:- Chain A: E.48, C.66, T.68, Y.112, S.120
2 PLIP interactions:2 interactions with chain A- Hydrogen bonds: A:C.66, A:S.120
PEG.7: 1 residues within 4Å:- Chain A: K.117
No protein-ligand interaction detected (PLIP)PEG.19: 5 residues within 4Å:- Chain C: E.48, C.66, T.68, Y.112, S.120
2 PLIP interactions:2 interactions with chain C- Hydrogen bonds: C:C.66, C:S.120
PEG.20: 1 residues within 4Å:- Chain C: K.117
No protein-ligand interaction detected (PLIP)- 2 x EDO: 1,2-ETHANEDIOL(Non-functional Binders)
- 10 x CA: CALCIUM ION(Non-functional Binders)
CA.9: 2 residues within 4Å:- Chain B: G.6, G.7
No protein-ligand interaction detected (PLIP)CA.10: 3 residues within 4Å:- Chain B: C.14, G.15
- Chain D: G.5
No protein-ligand interaction detected (PLIP)CA.11: 2 residues within 4Å:- Chain B: G.15, C.16
No protein-ligand interaction detected (PLIP)CA.12: 5 residues within 4Å:- Chain B: G.15, C.16, A.17
- Chain D: G.3, C.4
No protein-ligand interaction detected (PLIP)CA.13: 3 residues within 4Å:- Chain B: C.16, A.17, T.18
No protein-ligand interaction detected (PLIP)CA.22: 2 residues within 4Å:- Chain D: G.6, G.7
No protein-ligand interaction detected (PLIP)CA.23: 3 residues within 4Å:- Chain B: G.5
- Chain D: C.14, G.15
No protein-ligand interaction detected (PLIP)CA.24: 2 residues within 4Å:- Chain D: G.15, C.16
No protein-ligand interaction detected (PLIP)CA.25: 5 residues within 4Å:- Chain B: G.3, C.4
- Chain D: G.15, C.16, A.17
No protein-ligand interaction detected (PLIP)CA.26: 3 residues within 4Å:- Chain D: C.16, A.17, T.18
No protein-ligand interaction detected (PLIP)- Links
- RCSB PDBe PDBe-KB PDBj PDBsum CATH PLIP
- Citation
- Martin-Malpartida, P. et al., Structural basis for genome wide recognition of 5-bp GC motifs by SMAD transcription factors. Nat Commun (2017)
- Release Date
- 2017-11-15
- Peptides
- MH1 domain of human Smad4: AC
- SMTL:PDB
- SMTL Chain Id:
PDB Chain Id:A
AC
A
- Coordinates
- PDB Format
- Method
- X-RAY DIFFRACTION 2.05 Å
- Oligo State
- homo-dimer
- Ligands
- 2 x ZN: ZINC ION(Non-covalent)
- 8 x CL: CHLORIDE ION(Non-functional Binders)
- 4 x PEG: DI(HYDROXYETHYL)ETHER(Non-functional Binders)
- 2 x EDO: 1,2-ETHANEDIOL(Non-functional Binders)
- 10 x CA: CALCIUM ION(Non-functional Binders)
- Links
- RCSB PDBe PDBe-KB PDBj PDBsum CATH PLIP
- Citation
- Martin-Malpartida, P. et al., Structural basis for genome wide recognition of 5-bp GC motifs by SMAD transcription factors. Nat Commun (2017)
- Release Date
- 2017-11-15
- Peptides
- MH1 domain of human Smad4: AC
- SMTL:PDB
- SMTL Chain Id:
PDB Chain Id:A
AC
A