SMTL ID : 5mez.1

Crystal structure of Smad4-MH1 bound to the GGCT site.

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 2.98 Å

Oligo State

homo-dimer

Ligands

2 x ZN: ZINC ION(Non-covalent)

ZN.1: 4 residues within 4Å: Chain A: C.66, C.110, C.122, H.127 4 PLIP interactions: 4 interactions with chain A Metal complexes: A:C.66, A:C.110, A:C.122, A:H.127 ZN.3: 4 residues within 4Å: Chain B: C.66, C.110, C.122, H.127 4 PLIP interactions: 4 interactions with chain B Metal complexes: B:C.66, B:C.110, B:C.122, B:H.127

1 x CL: CHLORIDE ION(Non-functional Binders)

CL.2: 6 residues within 4Å: Chain A: R.22, Q.23, G.24, G.25, E.26, L.93 Ligand excluded by PLIP

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Martin-Malpartida, P. et al., Structural basis for genome wide recognition of 5-bp GC motifs by SMAD transcription factors. Nat Commun (2017)

Release Date

2017-11-15

Peptides

MH1 domain of human Smad4: AB

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
B

MH1 domain of human Smad4

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