SMTL ID : 5mf0.1

Crystal structure of Smad4-MH1 bound to the GGCCG site.

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 3.03 Å

Oligo State

homo-dimer

Ligands

2 x ZN: ZINC ION(Non-covalent)

ZN.1: 4 residues within 4Å: Chain A: C.66, C.110, C.122, H.127 4 PLIP interactions: 4 interactions with chain A Metal complexes: A:C.66, A:C.110, A:C.122, A:H.127 ZN.3: 4 residues within 4Å: Chain D: C.66, C.110, C.122, H.127 4 PLIP interactions: 4 interactions with chain D Metal complexes: D:C.66, D:C.110, D:C.122, D:H.127

2 x CL: CHLORIDE ION(Non-functional Binders)

CL.2: 3 residues within 4Å: Chain A: H.106, D.115, Y.128 Ligand excluded by PLIP CL.4: 3 residues within 4Å: Chain D: H.106, D.115, Y.128 Ligand excluded by PLIP

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Martin-Malpartida, P. et al., Structural basis for genome wide recognition of 5-bp GC motifs by SMAD transcription factors. Nat Commun (2017)

Release Date

2017-11-15

Peptides

MH1 domain of human Smad4: AD

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

D
B

MH1 domain of human Smad4

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