SMTL ID : 5mf2.1 (3 other biounits)

Bacteriophage T5 distal tail protein pb9 co-crystallized with Tb-Xo4

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 2.00 Å

Oligo State

monomer

Ligands

3 x TB: TERBIUM(III) ION(Non-functional Binders)(Non-covalent)

TB.1: 0 residues within 4Å: (No contacts) No protein-ligand interaction detected (PLIP) TB.2: 1 residues within 4Å: Chain A: E.18 1 PLIP interactions: 1 interactions with chain A Metal complexes: A:E.18 TB.3: 1 residues within 4Å: Chain A: E.18 1 PLIP interactions: 1 interactions with chain A Metal complexes: A:E.18

1 x 7MT: Tb-Xo4(Non-covalent)

7MT.4: 4 residues within 4Å: Chain A: R.68, E.71, R.74, T.75 7 PLIP interactions: 6 interactions with chain A, 1 Ligand-Ligand interactions Hydrophobic interactions: A:T.75 Salt bridges: A:R.68, A:E.71, A:E.71, A:E.71 Metal complexes: A:E.71, 7MT.4

2 x CL: CHLORIDE ION(Non-functional Binders)

CL.5: 3 residues within 4Å: Chain A: T.99, P.101, N.112 Ligand excluded by PLIP CL.6: 2 residues within 4Å: Chain A: S.142, N.149 Ligand excluded by PLIP

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Engilberge, S. et al., Crystallophore: a versatile lanthanide complex for protein crystallography combining nucleating effects, phasing properties, and luminescence. Chem Sci (2017)

Release Date

2017-09-20

Peptides

Distal tail protein: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

Distal tail protein

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