SMTL ID : 5mfm.1 (7 other biounits)

Designed armadillo repeat protein peptide fusion YIIIM6AII_GS11_(KR)5

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 2.30 Å

Oligo State

monomer

Ligands

5 x CA: CALCIUM ION(Non-covalent)

CA.1: 3 residues within 4Å: Chain A: P.226, N.227, E.228 2 PLIP interactions: 2 interactions with chain A Metal complexes: A:P.226, A:E.228 CA.2: 2 residues within 4Å: Chain A: P.142, E.144 3 PLIP interactions: 2 interactions with chain A, 1 Ligand-Water interactions Metal complexes: A:P.142, A:E.144, H2O.3 CA.3: 2 residues within 4Å: Chain A: P.100, E.102 2 PLIP interactions: 2 interactions with chain A Metal complexes: A:P.100, A:E.102 CA.4: 2 residues within 4Å: Chain A: P.184, E.186 2 PLIP interactions: 2 interactions with chain A Metal complexes: A:P.184, A:E.186 CA.5: 2 residues within 4Å: Chain A: P.16, Q.18 1 PLIP interactions: 1 interactions with chain A Metal complexes: A:P.16

1 x EDO: 1,2-ETHANEDIOL(Non-functional Binders)

EDO.6: 5 residues within 4Å: Chain A: Q.18, Q.22, N.59, Q.61, I.62 3 PLIP interactions: 3 interactions with chain A Hydrogen bonds: A:Q.18, A:N.59, A:N.59

2 x MG: MAGNESIUM ION(Non-covalent)

MG.7: 1 residues within 4Å: Chain A: N.185 No protein-ligand interaction detected (PLIP) MG.8: 3 residues within 4Å: Chain A: E.186, N.227, Q.229 No protein-ligand interaction detected (PLIP)

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Hansen, S. et al., Curvature of designed armadillo repeat proteins allows modular peptide binding. J. Struct. Biol. (2018)

Release Date

2017-09-13

Peptides

YIIIM6AII_GS11_(KR)5: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

YIIIM6AII_GS11_(KR)5

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