SMTL ID : 5mfm.3 (7 other biounits)

Designed armadillo repeat protein peptide fusion YIIIM6AII_GS11_(KR)5

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 2.30 Å

Oligo State

monomer

Ligands

7 x CA: CALCIUM ION(Non-covalent)

CA.1: 2 residues within 4Å: Chain A: P.142, E.144 2 PLIP interactions: 2 interactions with chain A Metal complexes: A:P.142, A:E.144 CA.2: 2 residues within 4Å: Chain A: P.268, E.270 2 PLIP interactions: 2 interactions with chain A Metal complexes: A:P.268, A:E.270 CA.3: 2 residues within 4Å: Chain A: P.184, E.186 3 PLIP interactions: 2 interactions with chain A, 1 Ligand-Water interactions Metal complexes: A:P.184, A:E.186, H2O.2 CA.4: 2 residues within 4Å: Chain A: E.310, E.312 1 PLIP interactions: 1 interactions with chain A Metal complexes: A:E.310 CA.7: 2 residues within 4Å: Chain A: P.226, E.228 3 PLIP interactions: 2 interactions with chain A, 1 Ligand-Water interactions Metal complexes: A:P.226, A:E.228, H2O.1 CA.8: 2 residues within 4Å: Chain A: P.100, E.102 2 PLIP interactions: 1 interactions with chain A, 1 Ligand-Water interactions Metal complexes: A:P.100, H2O.1 CA.9: 2 residues within 4Å: Chain A: P.58, E.60 1 PLIP interactions: 1 interactions with chain A Metal complexes: A:P.58

2 x MG: MAGNESIUM ION(Non-covalent)

MG.5: 4 residues within 4Å: Chain A: E.144, Q.148, Q.187, I.188 2 PLIP interactions: 1 interactions with chain A, 1 Ligand-Water interactions Metal complexes: A:E.144, H2O.1 MG.6: 3 residues within 4Å: Chain A: E.102, N.143, Q.145 No protein-ligand interaction detected (PLIP)

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Hansen, S. et al., Curvature of designed armadillo repeat proteins allows modular peptide binding. J. Struct. Biol. (2018)

Release Date

2017-09-13

Peptides

Importin subunit alpha: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
C

Importin subunit alpha