SMTL ID : 5mlh.1

Plantago Major multifunctional oxidoreductase in complex with 8-oxogeranial and NADP+

Coordinates

PDB Format

Method

X-RAY DIFFRACTION 1.86 Å

Oligo State

monomer

Ligands

1 x NA: SODIUM ION(Non-functional Binders)

NA.1: 2 residues within 4Å: Chain A: D.252, R.369 3 PLIP interactions: 3 interactions with chain A Hydrogen bonds: A:R.369 Water bridges: A:R.369, A:S.377

1 x XOG: (2E,6E)-2,6-dimethylocta-2,6-dienedial(Non-covalent)

XOG.2: 10 residues within 4Å: Chain A: K.147, F.153, I.156, N.205, M.215, V.347, I.350, P.351, C.352 Ligands: CA.5 5 PLIP interactions: 5 interactions with chain A Hydrophobic interactions: A:K.147, A:F.153, A:I.156, A:V.347, A:I.350

1 x GOL: GLYCEROL(Non-functional Binders)

GOL.3: 5 residues within 4Å: Chain A: Q.294, F.295, G.296, K.383, P.389 No protein-ligand interaction detected (PLIP)

1 x NAP: NADP NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE(Non-covalent)

NAP.4: 29 residues within 4Å: Chain A: G.33, V.34, T.35, G.36, I.37, A.62, R.63, R.64, C.80, D.81, I.82, S.83, V.104, T.105, W.106, M.122, Q.143, T.144, G.145, F.178, Y.179, P.203, G.204, I.206, S.213, M.214, M.215, F.343 Ligands: CA.5 29 PLIP interactions: 29 interactions with chain A Hydrophobic interactions: A:I.206, A:I.206 Hydrogen bonds: A:G.33, A:T.35, A:I.37, A:R.63, A:R.64, A:D.81, A:I.82, A:S.83, A:T.105, A:Q.143, A:Q.143, A:I.206, A:M.214, A:M.215 Water bridges: A:V.38, A:V.38, A:R.63, A:R.63, A:R.64, A:K.147, A:Y.179, A:Y.212, A:M.215, A:M.215 Salt bridges: A:R.63, A:R.64 pi-Cation interactions: A:K.147

1 x CA: CALCIUM ION(Non-covalent)

CA.5: 6 residues within 4Å: Chain A: G.145, R.146, K.147, Y.179 Ligands: XOG.2, NAP.4 1 PLIP interactions: 1 interactions with chain A Metal complexes: A:Y.179

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Fellows, R. et al., A multisubstrate reductase from Plantago major: structure-function in the short chain reductase superfamily. Sci Rep (2018)

Release Date

2018-08-01

Peptides

Progesterone 5-beta-reductase: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

Progesterone 5-beta-reductase

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