SMTL ID : 5mmn.1

E. coli DNA Gyrase B 24 kDa ATPase domain in complex with 1-ethyl-3-[8-methyl-5-(2-methyl-pyridin-4-yl)-isoquinolin-3-yl]-urea

Coordinates

PDB Format

Method

X-RAY DIFFRACTION 1.90 Å

Oligo State

monomer

Ligands

1 x O54: 1-ethyl-3-[8-methyl-5-(2-methylpyridin-4-yl)isoquinolin-3-yl]urea(Non-covalent)

O54.1: 13 residues within 4Å: Chain A: V.57, N.60, A.61, E.64, V.85, D.87, R.90, G.91, I.92, P.93, I.108, T.179, V.181 12 PLIP interactions: 12 interactions with chain A Hydrophobic interactions: A:V.57, A:N.60, A:V.85, A:I.92, A:I.92, A:I.108 Hydrogen bonds: A:D.87, A:D.87, A:D.87 Water bridges: A:N.60, A:G.91, A:T.179

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Panchaud, P. et al., Discovery and Optimization of Isoquinoline Ethyl Ureas as Antibacterial Agents. J. Med. Chem. (2017)

Release Date

2017-04-26

Peptides

DNA gyrase subunit B: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

DNA gyrase subunit B

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