- Coordinates
- PDB Format
- Method
- X-RAY DIFFRACTION 3.70 Å
- Oligo State
- homo-dimer
- Ligands
- 2 x UDP: URIDINE-5'-DIPHOSPHATE(Non-covalent)
- 2 x UMP: 2'-DEOXYURIDINE 5'-MONOPHOSPHATE(Non-covalent)
UMP.2: 20 residues within 4Å:- Chain A: I.51, A.52, K.55, E.74, W.79, L.103, M.106, Y.107, F.117, Q.118, E.148, R.149, D.154, F.158, R.213, R.215, E.218, Y.225
- Ligands: UDP.1, MG.3
12 PLIP interactions:12 interactions with chain A- Hydrophobic interactions: A:I.51, A:W.79
- Hydrogen bonds: A:A.52, A:Y.107, A:Q.118, A:R.215, A:E.218
- Salt bridges: A:K.55, A:R.149, A:R.213, A:R.215
- pi-Stacking: A:F.117
UMP.5: 20 residues within 4Å:- Chain B: N.50, I.51, A.52, K.55, E.74, W.79, L.103, M.106, Y.107, F.117, Q.118, R.125, R.149, D.154, F.158, R.213, R.215, E.218
- Ligands: UDP.4, MG.6
12 PLIP interactions:12 interactions with chain B- Hydrophobic interactions: B:I.51, B:W.79
- Hydrogen bonds: B:A.52, B:Y.107, B:Y.107, B:Q.118, B:Q.118, B:R.215
- Salt bridges: B:K.55, B:R.149, B:R.213, B:R.215
- 2 x MG: MAGNESIUM ION(Non-covalent)
- Links
- RCSB PDBe PDBe-KB PDBj PDBsum CATH PLIP
- Citation
- Hammam, K. et al., Dual protein kinase and nucleoside kinase modulators for rationally designed polypharmacology. Nat Commun (2017)
- Release Date
- 2017-11-22
- Peptides
- Deoxycytidine kinase: AB
- SMTL:PDB
- SMTL Chain Id:
PDB Chain Id:A
CB
D
- Coordinates
- PDB Format
- Method
- X-RAY DIFFRACTION 3.70 Å
- Oligo State
- homo-dimer
- Ligands
- 2 x UDP: URIDINE-5'-DIPHOSPHATE(Non-covalent)
- 2 x UMP: 2'-DEOXYURIDINE 5'-MONOPHOSPHATE(Non-covalent)
- 2 x MG: MAGNESIUM ION(Non-covalent)
- Links
- RCSB PDBe PDBe-KB PDBj PDBsum CATH PLIP
- Citation
- Hammam, K. et al., Dual protein kinase and nucleoside kinase modulators for rationally designed polypharmacology. Nat Commun (2017)
- Release Date
- 2017-11-22
- Peptides
- Deoxycytidine kinase: AB
- SMTL:PDB
- SMTL Chain Id:
PDB Chain Id:A
CB
D