SMTL ID : 5mqs.1

Sialidase BT_1020

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 3.00 Å

Oligo State

monomer

Ligands

1 x AHR: alpha-L-arabinofuranose(Non-covalent)

AHR.1: 11 residues within 4Å: Chain A: E.694, F.695, Y.701, I.708, C.710, F.750, G.804, W.942, W.947, Y.1016, H.1018 5 PLIP interactions: 5 interactions with chain A Hydrogen bonds: A:Y.701, A:Y.701, A:G.804, A:W.942, A:Y.1016

1 x NA: SODIUM ION(Non-functional Binders)

NA.2: 3 residues within 4Å: Chain A: Q.44, E.494, N.495 1 PLIP interactions: 1 interactions with chain A Hydrogen bonds: A:E.494

1 x CA: CALCIUM ION(Non-covalent)

CA.3: 4 residues within 4Å: Chain A: D.452, D.454, D.457, E.597 4 PLIP interactions: 4 interactions with chain A Metal complexes: A:D.452, A:D.452, A:D.454, A:D.457

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Ndeh, D. et al., Complex pectin metabolism by gut bacteria reveals novel catalytic functions. Nature (2017)

Release Date

2017-03-22

Peptides

Beta-L-arabinobiosidase: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

Beta-L-arabinobiosidase

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