SMTL ID : 5mru.1

TetR(class A) in complex with 5a,6-anhydrotetracycline and magnesium

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 2.55 Å

Oligo State

homo-dimer

Ligands

2 x TDC: 5A,6-ANHYDROTETRACYCLINE

TDC.1: 14 residues within 4Å: Chain A: L.60, H.64, S.67, N.82, F.86, H.100, T.103, R.104, P.105, Q.116, L.134, M.135, S.138 Ligands: MG.2 5 PLIP interactions: 5 interactions with chain A Hydrogen bonds: A:N.82, A:N.82, A:T.103, A:Q.116, A:S.138 TDC.3: 14 residues within 4Å: Chain B: L.60, H.64, S.67, N.82, F.86, H.100, T.103, R.104, P.105, Q.116, L.134, M.135, S.138 Ligands: MG.4 9 PLIP interactions: 9 interactions with chain B Hydrogen bonds: B:N.82, B:N.82, B:T.103, B:Q.116, B:S.138 Water bridges: B:T.103, B:T.103, B:T.103, B:T.103

2 x MG: MAGNESIUM ION(Non-covalent)

MG.2: 3 residues within 4Å: Chain A: H.100, T.103 Ligands: TDC.1 4 PLIP interactions: 1 interactions with chain A, 3 Ligand-Water interactions Metal complexes: A:H.100, H2O.1, H2O.1, H2O.1 MG.4: 3 residues within 4Å: Chain B: H.100, T.103 Ligands: TDC.3 4 PLIP interactions: 1 interactions with chain B, 3 Ligand-Water interactions Metal complexes: B:H.100, H2O.1, H2O.1, H2O.1

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Hinrichs, W. et al., TetR(class A) in complex with 5a,6-anhydrotetracycline and magnesium. To Be Published

Release Date

2018-01-17

Peptides

Tetracycline Repressor, class A: AB

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
A

Tetracycline Repressor, class A