- Coordinates
- PDB Format
- Method
- X-RAY DIFFRACTION 2.10 Å
- Oligo State
- homo-trimer
- Ligands
- 1 x EPE: 4-(2-HYDROXYETHYL)-1-PIPERAZINE ETHANESULFONIC ACID(Non-functional Binders)
- 6 x CA: CALCIUM ION(Non-covalent)
- 22 x EDO: 1,2-ETHANEDIOL(Non-functional Binders)
EDO.4: 7 residues within 4Å:- Chain A: T.269, D.270, N.271
- Chain C: I.42, N.43, F.99, Y.104
Ligand excluded by PLIPEDO.8: 4 residues within 4Å:- Chain B: D.36, W.92, E.200, R.286
Ligand excluded by PLIPEDO.9: 6 residues within 4Å:- Chain B: G.56, Q.57, G.58, S.283, T.284, N.285
Ligand excluded by PLIPEDO.10: 5 residues within 4Å:- Chain B: T.61, S.62, K.88, E.89, K.90
Ligand excluded by PLIPEDO.11: 4 residues within 4Å:- Chain B: G.112, Y.113, G.151, G.152
Ligand excluded by PLIPEDO.12: 4 residues within 4Å:- Chain B: K.103, Y.105, A.129, D.180
Ligand excluded by PLIPEDO.13: 8 residues within 4Å:- Chain B: F.139, T.140, P.141, T.143, L.145, Q.146, S.147, K.148
Ligand excluded by PLIPEDO.14: 5 residues within 4Å:- Chain B: K.208, D.270, Y.272
- Chain C: R.130, G.131
Ligand excluded by PLIPEDO.15: 7 residues within 4Å:- Chain B: Q.292, L.293, K.294, R.302, P.303, V.304, E.305
Ligand excluded by PLIPEDO.18: 5 residues within 4Å:- Chain C: D.36, L.59, W.92, R.286
- Ligands: EDO.25
Ligand excluded by PLIPEDO.19: 5 residues within 4Å:- Chain C: Q.40, E.41, K.96, F.264, H.265
Ligand excluded by PLIPEDO.20: 6 residues within 4Å:- Chain C: G.56, Q.57, G.58, S.283, T.284, N.285
Ligand excluded by PLIPEDO.21: 6 residues within 4Å:- Chain A: K.316
- Chain C: F.158, V.159, D.160, D.161, K.206
Ligand excluded by PLIPEDO.22: 5 residues within 4Å:- Chain C: L.145, Q.146, S.147, V.184, D.185
Ligand excluded by PLIPEDO.23: 4 residues within 4Å:- Chain C: S.192, T.193, P.194, F.238
Ligand excluded by PLIPEDO.24: 5 residues within 4Å:- Chain C: R.195, E.242, Q.243, D.244, I.245
Ligand excluded by PLIPEDO.25: 6 residues within 4Å:- Chain C: D.36, A.93, I.153, D.154, E.200
- Ligands: EDO.18
Ligand excluded by PLIPEDO.26: 0 residues within 4Å:- (No contacts)
Ligand excluded by PLIPEDO.27: 7 residues within 4Å:- Chain C: Q.292, L.293, K.294, R.302, P.303, V.304, E.305
Ligand excluded by PLIPEDO.28: 4 residues within 4Å:- Chain C: P.266, N.271, Y.273, L.314
Ligand excluded by PLIPEDO.29: 10 residues within 4Å:- Chain C: I.394, Y.395, F.396, P.399, G.402, H.403, K.426, C.428, S.429, H.431
Ligand excluded by PLIPEDO.30: 1 residues within 4Å:- Chain C: R.425
Ligand excluded by PLIP- 1 x 144: TRIS-HYDROXYMETHYL-METHYL-AMMONIUM(Non-covalent)
- Links
- RCSB PDBe PDBe-KB PDBj PDBsum CATH PLIP
- Citation
- Ndeh, D. et al., Complex pectin metabolism by gut bacteria reveals novel catalytic functions. Nature (2017)
- Release Date
- 2017-03-22
- Peptides
- Putative endo-1,4-beta-xylanase: ABC
- SMTL:PDB
- SMTL Chain Id:
PDB Chain Id:A
AB
BC
C
- Coordinates
- PDB Format
- Method
- X-RAY DIFFRACTION 2.10 Å
- Oligo State
- homo-trimer
- Ligands
- 1 x EPE: 4-(2-HYDROXYETHYL)-1-PIPERAZINE ETHANESULFONIC ACID(Non-functional Binders)
- 6 x CA: CALCIUM ION(Non-covalent)
- 22 x EDO: 1,2-ETHANEDIOL(Non-functional Binders)
- 1 x 144: TRIS-HYDROXYMETHYL-METHYL-AMMONIUM(Non-covalent)
- Links
- RCSB PDBe PDBe-KB PDBj PDBsum CATH PLIP
- Citation
- Ndeh, D. et al., Complex pectin metabolism by gut bacteria reveals novel catalytic functions. Nature (2017)
- Release Date
- 2017-03-22
- Peptides
- Putative endo-1,4-beta-xylanase: ABC
- SMTL:PDB
- SMTL Chain Id:
PDB Chain Id:A
AB
BC
C