SMTL ID : 5mtj.1

Yes1-SH2 in complex with monobody Mb(Yes_1)

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 1.95 Å

Oligo State

hetero-1-1-mer

Ligands

1 x SO4: SULFATE ION(Non-functional Binders)

SO4.1: 8 residues within 4Å: Chain A: R.19, R.39, S.41, E.42, T.43, S.49, K.67 Chain B: Y.85 8 PLIP interactions: 8 interactions with chain A Hydrogen bonds: A:S.41, A:E.42, A:T.43 Water bridges: A:R.19, A:R.19 Salt bridges: A:R.19, A:R.39, A:K.67

2 x CXS: 3-CYCLOHEXYL-1-PROPYLSULFONIC ACID(Non-covalent)

CXS.2: 5 residues within 4Å: Chain B: V.13, S.23, K.56, S.57, T.58 5 PLIP interactions: 5 interactions with chain B Hydrophobic interactions: B:V.13 Hydrogen bonds: B:S.57, B:T.58, B:T.58 Water bridges: B:K.56 CXS.3: 5 residues within 4Å: Chain B: A.14, T.16, S.19, L.20, L.21 4 PLIP interactions: 4 interactions with chain B Hydrophobic interactions: B:A.14, B:T.16, B:L.21 Water bridges: B:S.19

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Kukenshoner, T. et al., Selective Targeting of SH2 Domain-Phosphotyrosine Interactions of Src Family Tyrosine Kinases with Monobodies. J. Mol. Biol. (2017)

Release Date

2017-04-05

Peptides

Tyrosine-protein kinase Yes: A
Monobody Mb(Yes_1): B

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
B

Tyrosine-protein kinase Yes

Monobody Mb(Yes_1)