SMTL ID : 5mu5.1

Structure of MAf glycosyltransferase from Magnetospirillum magneticum AMB-1

Coordinates

PDB Format

Method

X-RAY DIFFRACTION 2.30 Å

Oligo State

monomer

Ligands

1 x SO4: SULFATE ION(Non-functional Binders)

SO4.1: 5 residues within 4Å: Chain A: S.280, C.303, G.304, T.305, V.393 3 PLIP interactions: 3 interactions with chain A Hydrogen bonds: A:S.280, A:T.305, A:T.305

2 x CL: CHLORIDE ION(Non-functional Binders)

CL.2: 1 residues within 4Å: Chain A: Q.270 Ligand excluded by PLIP CL.3: 4 residues within 4Å: Chain A: R.419, N.420, G.461, V.462 Ligand excluded by PLIP

1 x PGE: TRIETHYLENE GLYCOL(Non-functional Binders)

PGE.4: 9 residues within 4Å: Chain A: Q.36, S.37, F.51, E.54, F.55, L.56, N.153, D.155, F.156 1 PLIP interactions: 1 interactions with chain A Hydrogen bonds: A:N.153

1 x PG4: TETRAETHYLENE GLYCOL(Non-functional Binders)

PG4.5: 3 residues within 4Å: Chain A: R.419, F.459, D.494 1 PLIP interactions: 1 interactions with chain A Hydrogen bonds: A:R.419

4 x EDO: 1,2-ETHANEDIOL(Non-functional Binders)

EDO.6: 2 residues within 4Å: Chain A: N.420, R.454 3 PLIP interactions: 3 interactions with chain A Hydrogen bonds: A:N.420, A:R.454, A:R.454 EDO.7: 2 residues within 4Å: Chain A: R.540, R.543 2 PLIP interactions: 2 interactions with chain A Hydrogen bonds: A:R.540, A:R.540 EDO.8: 5 residues within 4Å: Chain A: M.23, P.24, E.25, M.26, R.173 2 PLIP interactions: 2 interactions with chain A Hydrogen bonds: A:E.25, A:M.26 EDO.9: 2 residues within 4Å: Chain A: R.482, Y.483 No protein-ligand interaction detected (PLIP)

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Sulzenbacher, G. et al., Glycosylate and move! The glycosyltransferase Maf is involved in bacterial flagella formation. Environ. Microbiol. (2018)

Release Date

2017-11-15

Peptides

Uncharacterized protein: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

Uncharacterized protein