SMTL ID : 5mun.1

Structural insight into zymogenic latency of gingipain K from Porphyromonas gingivalis.

Coordinates

PDB Format

Method

X-RAY DIFFRACTION 1.80 Å

Oligo State

homo-dimer

Ligands

1 x AZI: AZIDE ION(Non-covalent)

AZI.1: 5 residues within 4Å: Chain A: T.19, C.21 Chain B: T.19, T.20, C.21 1 PLIP interactions: 1 interactions with chain A Hydrogen bonds: A:T.19

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Pomowski, A. et al., Structural insights unravel the zymogenic mechanism of the virulence factor gingipain K from Porphyromonas gingivalis, a causative agent of gum disease from the human oral microbiome. J. Biol. Chem. (2017)

Release Date

2017-02-22

Peptides

Lys-gingipain W83: AB

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
B

Lys-gingipain W83